RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
CBX6-201ENST00000216083 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
CBX6-201ENST00000216083 SLIT3O75094 1523 aa18.79■□□□□ 0.6
CBX6-201ENST00000216083 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
CBX6-201ENST00000216083 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
CBX6-201ENST00000216083 SSH1Q8WYL5 1049 aa18.79■□□□□ 0.6
CBX6-201ENST00000216083 PXDNQ92626 1479 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 KRT24Q2M2I5 525 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 SKAP1Q86WV1 359 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 SPATA31A3Q5VYP0 1347 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
CBX6-201ENST00000216083 TNS3Q68CZ2 1445 aa18.77■□□□□ 0.6
CBX6-201ENST00000216083 COG6Q9Y2V7 657 aa18.77■□□□□ 0.6
CBX6-201ENST00000216083 GNAI1P63096 354 aa18.77■□□□□ 0.59
CBX6-201ENST00000216083 IFT57Q9NWB7 429 aa18.77■□□□□ 0.59
CBX6-201ENST00000216083 ZNF853P0CG23 659 aa18.76■□□□□ 0.59
CBX6-201ENST00000216083 RLBP1P12271 317 aa18.76■□□□□ 0.59
CBX6-201ENST00000216083 CFAP44Q96MT7 982 aa18.76■□□□□ 0.59
CBX6-201ENST00000216083 C8orf58Q8NAV2 365 aa18.76■□□□□ 0.59
CBX6-201ENST00000216083 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
CBX6-201ENST00000216083 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
CBX6-201ENST00000216083 RGPD5Q99666 1765 aa18.74■□□□□ 0.59
CBX6-201ENST00000216083 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
CBX6-201ENST00000216083 GAS2L2Q8NHY3 880 aa18.73■□□□□ 0.59
CBX6-201ENST00000216083 KIAA0232Q92628 1395 aa18.72■□□□□ 0.59
CBX6-201ENST00000216083 VAMP4O75379 141 aa18.72■□□□□ 0.59
CBX6-201ENST00000216083 SOS2Q07890 1332 aaPredicted RBP18.71■□□□□ 0.59
CBX6-201ENST00000216083 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
CBX6-201ENST00000216083 ERBB3P21860 1342 aa18.71■□□□□ 0.59
CBX6-201ENST00000216083 TWISTNBQ3B726 338 aaPredicted RBP18.71■□□□□ 0.58
CBX6-201ENST00000216083 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.58
CBX6-201ENST00000216083 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
CBX6-201ENST00000216083 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
CBX6-201ENST00000216083 HAP1P54257 671 aaPredicted RBP18.7■□□□□ 0.58
CBX6-201ENST00000216083 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
CBX6-201ENST00000216083 CRB1P82279 1406 aa18.69■□□□□ 0.58
CBX6-201ENST00000216083 CHL1O00533 1208 aa18.69■□□□□ 0.58
CBX6-201ENST00000216083 CT47B1P0C2W7 299 aaPredicted RBP18.69■□□□□ 0.58
CBX6-201ENST00000216083 PDE3AQ14432 1141 aa18.68■□□□□ 0.58
CBX6-201ENST00000216083 PHRF1Q9P1Y6 1649 aaKnown RBP18.68■□□□□ 0.58
CBX6-201ENST00000216083 TRIM27P14373 513 aa18.68■□□□□ 0.58
CBX6-201ENST00000216083 ZKSCAN2Q63HK3 967 aa18.68■□□□□ 0.58
CBX6-201ENST00000216083 LGR6Q9HBX8 967 aa18.67■□□□□ 0.58
CBX6-201ENST00000216083 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
CBX6-201ENST00000216083 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
CBX6-201ENST00000216083 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
CBX6-201ENST00000216083 UBE2Q2Q8WVN8 375 aa18.66■□□□□ 0.58
CBX6-201ENST00000216083 PRDM11Q9NQV5 511 aa18.66■□□□□ 0.58
CBX6-201ENST00000216083 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
CBX6-201ENST00000216083 MPRIPQ6WCQ1 1025 aa18.66■□□□□ 0.58
CBX6-201ENST00000216083 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
CBX6-201ENST00000216083 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
CBX6-201ENST00000216083 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
CBX6-201ENST00000216083 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
CBX6-201ENST00000216083 PLEKHO1Q53GL0 409 aaPredicted RBP18.62■□□□□ 0.57
CBX6-201ENST00000216083 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
CBX6-201ENST00000216083 CRYBG1Q9Y4K1 1723 aa18.62■□□□□ 0.57
CBX6-201ENST00000216083 PDE4AP27815 886 aa18.61■□□□□ 0.57
CBX6-201ENST00000216083 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
CBX6-201ENST00000216083 COL18A1P39060 1754 aa18.61■□□□□ 0.57
CBX6-201ENST00000216083 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
CBX6-201ENST00000216083 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
CBX6-201ENST00000216083 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
CBX6-201ENST00000216083 LTBP4Q8N2S1 1624 aa18.59■□□□□ 0.57
CBX6-201ENST00000216083 HTATSF1O43719 755 aaKnown RBP18.59■□□□□ 0.57
CBX6-201ENST00000216083 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
CBX6-201ENST00000216083 MVPQ14764 893 aaKnown RBP18.59■□□□□ 0.57
CBX6-201ENST00000216083 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
CBX6-201ENST00000216083 IGHDP01880 384 aa18.59■□□□□ 0.57
CBX6-201ENST00000216083 KCNQ3O43525 872 aa18.58■□□□□ 0.57
CBX6-201ENST00000216083 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.57
CBX6-201ENST00000216083 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.57
CBX6-201ENST00000216083 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.57
CBX6-201ENST00000216083 CPDO75976 1380 aa18.58■□□□□ 0.56
CBX6-201ENST00000216083 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 MEGF6O75095 1541 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 USP35Q9P2H5 1018 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
CBX6-201ENST00000216083 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
CBX6-201ENST00000216083 TOM1L2Q6ZVM7 507 aa18.56■□□□□ 0.56
CBX6-201ENST00000216083 NHSL1Q5SYE7 1610 aa18.56■□□□□ 0.56
CBX6-201ENST00000216083 KDM2BQ8NHM5 1336 aa18.56■□□□□ 0.56
CBX6-201ENST00000216083 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
CBX6-201ENST00000216083 ZNF428Q96B54 188 aa18.56■□□□□ 0.56
CBX6-201ENST00000216083 TATP17735 454 aaPredicted RBP18.55■□□□□ 0.56
CBX6-201ENST00000216083 TEFQ10587 303 aa18.55■□□□□ 0.56
CBX6-201ENST00000216083 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
CBX6-201ENST00000216083 CEMIPQ8WUJ3 1361 aa18.54■□□□□ 0.56
CBX6-201ENST00000216083 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
CBX6-201ENST00000216083 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
CBX6-201ENST00000216083 G2E3Q7L622 706 aa18.54■□□□□ 0.56
CBX6-201ENST00000216083 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
CBX6-201ENST00000216083 GSE1Q14687 1217 aa18.53■□□□□ 0.56
CBX6-201ENST00000216083 ARXQ96QS3 562 aa18.53■□□□□ 0.56
CBX6-201ENST00000216083 FAM208AQ9UK61 1670 aaKnown RBP18.52■□□□□ 0.56
CBX6-201ENST00000216083 LMO7Q8WWI1 1683 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms