RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
DNMT3B-201ENST00000201963 H3BQV1 296 aa13.9□□□□□ -0.19
DNMT3B-201ENST00000201963 IFFO2Q5TF58 517 aa13.9□□□□□ -0.19
DNMT3B-201ENST00000201963 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 NSD3Q9BZ95 1437 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 ZNF428Q96B54 188 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 ABCC3O15438 1527 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 GLI2P10070 1586 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
DNMT3B-201ENST00000201963 TRIM5Q9C035 493 aa13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 KIF3AQ9Y496 699 aa13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 ZNF530Q6P9A1 599 aaPredicted RBP13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
DNMT3B-201ENST00000201963 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 BTG4Q9NY30 223 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 HOMER1Q86YM7 354 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 BAG4O95429 457 aaKnown RBP13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 SASS6Q6UVJ0 657 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 DIP2CQ9Y2E4 1556 aa13.87□□□□□ -0.19
DNMT3B-201ENST00000201963 ZKSCAN1P17029 563 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 TPD52L1Q16890 204 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
DNMT3B-201ENST00000201963 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 MCM2P49736 904 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 FKBP5Q13451 457 aaPredicted RBP13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 PDCL2Q8N4E4 241 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 FAM177BA6PVY3 158 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TTC21BQ7Z4L5 1316 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 TWISTNBQ3B726 338 aaPredicted RBP13.85□□□□□ -0.19
DNMT3B-201ENST00000201963 DISP3Q9P2K9 1392 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 ERC2O15083 957 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 TRIM27P14373 513 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 KDM2BQ8NHM5 1336 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 GCP02774 474 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 PTCD1O75127 700 aaKnown RBP13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 MPRIPQ6WCQ1 1025 aa13.84□□□□□ -0.19
DNMT3B-201ENST00000201963 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.19
DNMT3B-201ENST00000201963 PARD3Q8TEW0 1356 aa13.83□□□□□ -0.19
DNMT3B-201ENST00000201963 ACSBG1Q96GR2 724 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 RIMS1Q86UR5 1692 aaKnown RBP13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 TPM3P06753 285 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 PLEKHG1Q9ULL1 1385 aa13.83□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC66A2RUB6 948 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 EXOC5O00471 708 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 TEX35Q5T0J7 233 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 LRRIQ1Q96JM4 1722 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 TMPOP42166 694 aaKnown RBP13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 ANKRD24Q8TF21 1146 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
DNMT3B-201ENST00000201963 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 RLBP1P12271 317 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 USP21Q9UK80 565 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 FOSBP53539 338 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 TBC1D9Q6ZT07 1266 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 GDPD2Q9HCC8 539 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
DNMT3B-201ENST00000201963 HSPA1LP34931 641 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 DYNC1I1O14576 645 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 CABP4P57796 275 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 AIMP1Q12904 312 aaKnown RBP13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 ZSCAN23Q3MJ62 389 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 MNS1Q8NEH6 495 aa13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
DNMT3B-201ENST00000201963 OFD1O75665 1012 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 PER1O15534 1290 aaPredicted RBP13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CREBRFQ8IUR6 639 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 TSPYL4Q9UJ04 414 aa13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
DNMT3B-201ENST00000201963 GPS2Q13227 327 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 FYB1O15117 783 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
DNMT3B-201ENST00000201963 GORABQ5T7V8 394 aa13.77□□□□□ -0.2
DNMT3B-201ENST00000201963 ARGLU1Q9NWB6 273 aaPredicted RBP13.77□□□□□ -0.2
DNMT3B-201ENST00000201963 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms