RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
CLDN18-201ENST00000183605 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
CLDN18-201ENST00000183605 VPS37CA5D8V6 355 aaPredicted RBP12.09□□□□□ -0.47
CLDN18-201ENST00000183605 TNNT1P13805 278 aa12.09□□□□□ -0.47
CLDN18-201ENST00000183605 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
CLDN18-201ENST00000183605 CHMP4AQ9BY43 222 aa12.09□□□□□ -0.47
CLDN18-201ENST00000183605 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.47
CLDN18-201ENST00000183605 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.47
CLDN18-201ENST00000183605 AGLP35573 1532 aa12.08□□□□□ -0.47
CLDN18-201ENST00000183605 SPAG9O60271 1321 aaKnown RBP12.08□□□□□ -0.48
CLDN18-201ENST00000183605 KDM4AO75164 1064 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 CYP2E1P05181 493 aaPredicted RBP12.08□□□□□ -0.48
CLDN18-201ENST00000183605 PHF23Q9BUL5 403 aaPredicted RBP12.08□□□□□ -0.48
CLDN18-201ENST00000183605 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 EVC2Q86UK5 1308 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 GNAI1P63096 354 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 ABCC1P33527 1531 aa12.08□□□□□ -0.48
CLDN18-201ENST00000183605 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 TIGD1Q96MW7 591 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 MAST1Q9Y2H9 1570 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
CLDN18-201ENST00000183605 LARP6Q9BRS8 491 aaKnown RBP12.07□□□□□ -0.48
CLDN18-201ENST00000183605 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.07□□□□□ -0.48
CLDN18-201ENST00000183605 V9GYY5 206 aaPredicted RBP12.07□□□□□ -0.48
CLDN18-201ENST00000183605 PDIA4P13667 645 aaKnown RBP12.07□□□□□ -0.48
CLDN18-201ENST00000183605 MX1P20591 662 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 PYCARDQ9ULZ3 195 aa12.07□□□□□ -0.48
CLDN18-201ENST00000183605 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLDN18-201ENST00000183605 ATAD2Q6PL18 1390 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 BRD1O95696 1058 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 PTGS1P23219 599 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLDN18-201ENST00000183605 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
CLDN18-201ENST00000183605 PPIP5K1Q6PFW1 1433 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 CCDC186Q7Z3E2 898 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
CLDN18-201ENST00000183605 SYNMO15061 1565 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 CAMK4Q16566 473 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 KRT222Q8N1A0 295 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 TERF2IPQ9NYB0 399 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 IL16Q14005 1332 aa12.05□□□□□ -0.48
CLDN18-201ENST00000183605 ZNF142P52746 1687 aaPredicted RBP12.05□□□□□ -0.48
CLDN18-201ENST00000183605 CROCC2H7BZ55 1655 aa12.04□□□□□ -0.48
CLDN18-201ENST00000183605 HTATSF1O43719 755 aaKnown RBP12.04□□□□□ -0.48
CLDN18-201ENST00000183605 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
CLDN18-201ENST00000183605 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
CLDN18-201ENST00000183605 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
CLDN18-201ENST00000183605 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
CLDN18-201ENST00000183605 GTF2F1P35269 517 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLDN18-201ENST00000183605 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
CLDN18-201ENST00000183605 DCTPP1Q9H773 170 aa12.04□□□□□ -0.48
CLDN18-201ENST00000183605 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
CLDN18-201ENST00000183605 UBE2HP62256 183 aa12.03□□□□□ -0.48
CLDN18-201ENST00000183605 KIAA1524Q8TCG1 905 aa12.03□□□□□ -0.48
CLDN18-201ENST00000183605 HDGFL2Q7Z4V5 671 aaPredicted RBP12.03□□□□□ -0.48
CLDN18-201ENST00000183605 RPAP2Q8IXW5 612 aaPredicted RBP12.03□□□□□ -0.48
CLDN18-201ENST00000183605 HECW2Q9P2P5 1572 aa12.03□□□□□ -0.48
CLDN18-201ENST00000183605 VAMP4O75379 141 aa12.02□□□□□ -0.48
CLDN18-201ENST00000183605 AFAP1Q8N556 730 aa12.02□□□□□ -0.48
CLDN18-201ENST00000183605 DTNBO60941 627 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 EXOC6BQ9Y2D4 811 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.02□□□□□ -0.49
CLDN18-201ENST00000183605 HAP1P54257 671 aaPredicted RBP12.02□□□□□ -0.49
CLDN18-201ENST00000183605 ARHGAP45Q92619 1136 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 SRCIN1Q9C0H9 1055 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 TMEM51Q9NW97 253 aa12.02□□□□□ -0.49
CLDN18-201ENST00000183605 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
CLDN18-201ENST00000183605 NAA30Q147X3 362 aaPredicted RBP12.01□□□□□ -0.49
CLDN18-201ENST00000183605 DNAJC2Q99543 621 aaKnown RBP12.01□□□□□ -0.49
CLDN18-201ENST00000183605 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
CLDN18-201ENST00000183605 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
CLDN18-201ENST00000183605 IPO4Q8TEX9 1081 aaKnown RBP12.01□□□□□ -0.49
CLDN18-201ENST00000183605 BECN2A8MW95 431 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 BICD2Q8TD16 824 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 SPTLC3Q9NUV7 552 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 LRMPQ12912 555 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 MAP3K11Q16584 847 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 TEX35Q5T0J7 233 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 NUP62CLQ9H1M0 184 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 TNMDQ9H2S6 317 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 TRMT1Q9NXH9 659 aaKnown RBP12□□□□□ -0.49
CLDN18-201ENST00000183605 KIDINS220Q9ULH0 1771 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 STX6O43752 255 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 FCHSD2O94868 740 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 NCBP1Q09161 790 aaKnown RBP12□□□□□ -0.49
CLDN18-201ENST00000183605 CEP135Q66GS9 1140 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 FERMT3Q86UX7 667 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 PAXBP1Q9Y5B6 917 aa12□□□□□ -0.49
CLDN18-201ENST00000183605 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
CLDN18-201ENST00000183605 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms