RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 NCAPD2Q15021 1401 aa34.21■■■■□ 3.07
TSR3-201ENST00000007390 NBPF14Q5TI25 921 aa34.2■■■■□ 3.07
TSR3-201ENST00000007390 RAPGEF4Q8WZA2 1011 aa34.2■■■■□ 3.07
TSR3-201ENST00000007390 ACSBG1Q96GR2 724 aa34.19■■■■□ 3.06
TSR3-201ENST00000007390 KNSTRNQ9Y448 316 aa34.19■■■■□ 3.06
TSR3-201ENST00000007390 SHANK3Q9BYB0 1731 aa34.18■■■■□ 3.06
TSR3-201ENST00000007390 LRP5O75197 1615 aa34.18■■■■□ 3.06
TSR3-201ENST00000007390 TNNT2P45379 298 aaPredicted RBP34.17■■■■□ 3.06
TSR3-201ENST00000007390 TATP17735 454 aaPredicted RBP34.16■■■■□ 3.06
TSR3-201ENST00000007390 PROM2Q8N271 834 aa34.16■■■■□ 3.06
TSR3-201ENST00000007390 TXNRD1Q16881 649 aa34.12■■■■□ 3.05
TSR3-201ENST00000007390 AMER1Q5JTC6 1135 aaPredicted RBP34.12■■■■□ 3.05
TSR3-201ENST00000007390 MORC1Q86VD1 984 aa34.12■■■■□ 3.05
TSR3-201ENST00000007390 BTAF1O14981 1849 aa34.11■■■■□ 3.05
TSR3-201ENST00000007390 EYA1Q99502 592 aa34.09■■■■□ 3.05
TSR3-201ENST00000007390 PCDH11XQ9BZA7 1347 aa34.07■■■■□ 3.05
TSR3-201ENST00000007390 PCDH11YQ9BZA8 1340 aa34.07■■■■□ 3.05
TSR3-201ENST00000007390 EIF4A2Q14240 407 aaKnown RBP34.07■■■■□ 3.04
TSR3-201ENST00000007390 DOT1LQ8TEK3 1739 aa34.07■■■■□ 3.04
TSR3-201ENST00000007390 PER1O15534 1290 aaPredicted RBP34.06■■■■□ 3.04
TSR3-201ENST00000007390 ANO8Q9HCE9 1232 aaPredicted RBP34.06■■■■□ 3.04
TSR3-201ENST00000007390 PKD1L3Q7Z443 1732 aa34.05■■■■□ 3.04
TSR3-201ENST00000007390 PRIM1P49642 420 aaKnown RBP34.03■■■■□ 3.04
TSR3-201ENST00000007390 KAT6BQ8WYB5 2073 aa34.03■■■■□ 3.04
TSR3-201ENST00000007390 PLEKHG2Q9H7P9 1386 aa34.02■■■■□ 3.04
TSR3-201ENST00000007390 CYP27B1O15528 508 aa34■■■■□ 3.03
TSR3-201ENST00000007390 SYTL4Q96C24 671 aaPredicted RBP34■■■■□ 3.03
TSR3-201ENST00000007390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34■■■■□ 3.03
TSR3-201ENST00000007390 IGSF1Q8N6C5 1336 aa34■■■■□ 3.03
TSR3-201ENST00000007390 PAPPAQ13219 1627 aa33.97■■■■□ 3.03
TSR3-201ENST00000007390 SPG7Q9UQ90 795 aa33.97■■■■□ 3.03
TSR3-201ENST00000007390 NPC1L1Q9UHC9 1359 aa33.97■■■■□ 3.03
TSR3-201ENST00000007390 STK32BQ9NY57 414 aa33.96■■■■□ 3.03
TSR3-201ENST00000007390 SLC15A2Q16348 729 aa33.94■■■■□ 3.02
TSR3-201ENST00000007390 SLC27A3Q5K4L6 730 aa33.94■■■■□ 3.02
TSR3-201ENST00000007390 CASZ1Q86V15 1759 aa33.93■■■■□ 3.02
TSR3-201ENST00000007390 NKX1-1Q15270 411 aaPredicted RBP33.92■■■■□ 3.02
TSR3-201ENST00000007390 LRRC4BQ9NT99 713 aa33.92■■■■□ 3.02
TSR3-201ENST00000007390 CC2D1BQ5T0F9 858 aaKnown RBP33.89■■■■□ 3.02
TSR3-201ENST00000007390 LY75O60449 1722 aa33.89■■■■□ 3.02
TSR3-201ENST00000007390 TOGARAM1Q9Y4F4 1720 aa33.88■■■■□ 3.01
TSR3-201ENST00000007390 SPON1Q9HCB6 807 aa33.87■■■■□ 3.01
TSR3-201ENST00000007390 IL13P35225 146 aa33.86■■■■□ 3.01
TSR3-201ENST00000007390 MTHFSP49914 203 aa33.85■■■■□ 3.01
TSR3-201ENST00000007390 IFNL2Q8IZJ0 200 aa33.85■■■■□ 3.01
TSR3-201ENST00000007390 PHKG2P15735 406 aa33.84■■■■□ 3.01
TSR3-201ENST00000007390 PDGFDQ9GZP0 370 aaPredicted RBP33.84■■■■□ 3.01
TSR3-201ENST00000007390 KDRP35968 1356 aa33.84■■■■□ 3.01
TSR3-201ENST00000007390 ZNF827Q17R98 1081 aa33.82■■■■□ 3
TSR3-201ENST00000007390 MPRIPQ6WCQ1 1025 aa33.81■■■■□ 3
TSR3-201ENST00000007390 AKT1S1Q96B36 256 aa33.81■■■■□ 3
TSR3-201ENST00000007390 AEBP1Q8IUX7 1158 aa33.8■■■■□ 3
TSR3-201ENST00000007390 CCNL1Q9UK58 526 aaPredicted RBP33.8■■■■□ 3
TSR3-201ENST00000007390 ITGB4P16144 1822 aa33.8■■■■□ 3
TSR3-201ENST00000007390 PLEKHO1Q53GL0 409 aaPredicted RBP33.79■■■■□ 3
TSR3-201ENST00000007390 AMOTQ4VCS5 1084 aa33.78■■■■□ 3
TSR3-201ENST00000007390 PALLDQ8WX93 1383 aa33.77■■■■□ 3
TSR3-201ENST00000007390 KCNQ4P56696 695 aa33.77■■■■□ 3
TSR3-201ENST00000007390 SULT6B1Q6IMI4 303 aa33.77■■■■□ 3
TSR3-201ENST00000007390 PIGBQ92521 554 aa33.77■■■■□ 3
TSR3-201ENST00000007390 SMARCC1Q92922 1105 aaPredicted RBP33.76■■■□□ 2.99
TSR3-201ENST00000007390 ZBTB7AO95365 584 aa33.75■■■□□ 2.99
TSR3-201ENST00000007390 QSER1Q2KHR3 1735 aa33.74■■■□□ 2.99
TSR3-201ENST00000007390 HSP90AB1P08238 724 aaKnown RBP33.73■■■□□ 2.99
TSR3-201ENST00000007390 TMOD3Q9NYL9 352 aa33.73■■■□□ 2.99
TSR3-201ENST00000007390 HMGB2P26583 209 aaKnown RBP33.72■■■□□ 2.99
TSR3-201ENST00000007390 ZNF530Q6P9A1 599 aaPredicted RBP33.72■■■□□ 2.99
TSR3-201ENST00000007390 MTFR1LQ9H019 292 aa33.72■■■□□ 2.99
TSR3-201ENST00000007390 COL3A1P02461 1466 aaPredicted RBP33.7■■■□□ 2.99
TSR3-201ENST00000007390 DIAPH1O60610 1272 aaKnown RBP33.7■■■□□ 2.99
TSR3-201ENST00000007390 DCAF5Q96JK2 942 aa33.7■■■□□ 2.99
TSR3-201ENST00000007390 PPP1R1BQ9UD71 204 aaPredicted RBP33.7■■■□□ 2.99
TSR3-201ENST00000007390 PTGER2P43116 358 aa33.69■■■□□ 2.98
TSR3-201ENST00000007390 ERVV-2B6SEH9 535 aa33.68■■■□□ 2.98
TSR3-201ENST00000007390 CNGB1Q14028 1251 aaPredicted RBP33.68■■■□□ 2.98
TSR3-201ENST00000007390 TFCP2L1Q9NZI6 479 aa33.68■■■□□ 2.98
TSR3-201ENST00000007390 PNPLA7Q6ZV29 1317 aa33.68■■■□□ 2.98
TSR3-201ENST00000007390 ATF5Q9Y2D1 282 aaPredicted RBP33.67■■■□□ 2.98
TSR3-201ENST00000007390 KDM6AO15550 1401 aaPredicted RBP33.67■■■□□ 2.98
TSR3-201ENST00000007390 C5P01031 1676 aa33.67■■■□□ 2.98
TSR3-201ENST00000007390 TUBGCP6Q96RT7 1819 aa33.65■■■□□ 2.98
TSR3-201ENST00000007390 C1orf141Q5JVX7 400 aa33.65■■■□□ 2.98
TSR3-201ENST00000007390 SLC16A10Q8TF71 515 aa33.65■■■□□ 2.98
TSR3-201ENST00000007390 SGIP1Q9BQI5 828 aa33.64■■■□□ 2.98
TSR3-201ENST00000007390 ASAP1Q9ULH1 1129 aa33.63■■■□□ 2.97
TSR3-201ENST00000007390 TAF1LQ8IZX4 1826 aa33.63■■■□□ 2.97
TSR3-201ENST00000007390 HMOX1P09601 288 aa33.61■■■□□ 2.97
TSR3-201ENST00000007390 ATG3Q9NT62 314 aa33.61■■■□□ 2.97
TSR3-201ENST00000007390 LOC102724428A0A0B4J2F2 783 aa33.6■■■□□ 2.97
TSR3-201ENST00000007390 SIK1P57059 783 aa33.6■■■□□ 2.97
TSR3-201ENST00000007390 C4BP0C0L5 1744 aa33.57■■■□□ 2.96
TSR3-201ENST00000007390 AKAP4Q5JQC9 854 aa33.57■■■□□ 2.96
TSR3-201ENST00000007390 PPP2R1AP30153 589 aa33.55■■■□□ 2.96
TSR3-201ENST00000007390 CABP4P57796 275 aa33.55■■■□□ 2.96
TSR3-201ENST00000007390 CFAP53Q96M91 514 aa33.55■■■□□ 2.96
TSR3-201ENST00000007390 COL24A1Q17RW2 1714 aa33.55■■■□□ 2.96
TSR3-201ENST00000007390 COL23A1Q86Y22 540 aaPredicted RBP33.53■■■□□ 2.96
TSR3-201ENST00000007390 FLAD1Q8NFF5 587 aa33.53■■■□□ 2.96
TSR3-201ENST00000007390 U2SURPO15042 1029 aaKnown RBP33.52■■■□□ 2.96
TSR3-201ENST00000007390 ZNF831Q5JPB2 1677 aa33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms