RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Fnbp4Q6ZQ03 1031 aa9.87□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Slx4ipQ9D7Y9 413 aa9.87□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Usp25P57080 1055 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Ano6Q6P9J9 911 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Brf1Q8CFK2 676 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Vps18Q8R307 973 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Cfap58B2RW38 873 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Cep135Q6P5D4 1140 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Bms1Q6PGF5 1284 aaKnown RBP9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Def6Q8C2K1 630 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Wdr33Q8K4P0 1330 aaKnown RBP9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Gm42641I6L9G2 585 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Ube2hP62257 183 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Rnf187Q8BFX1 236 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 AtripQ8BMG1 785 aa9.86□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Fam13aQ8BGI4 693 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Cep57l1Q8VDS7 400 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Paxbp1P58501 919 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Mcm6P97311 821 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Tpm4Q6IRU2 248 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Cdk19Q8BWD8 501 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 CenpqQ9CPQ5 267 aa9.85□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Fsd1Q7TPM6 496 aa9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Rufy1Q8BIJ7 712 aa9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 SelenooQ9DBC0 667 aa9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Prdm16A2A935 1275 aa9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Nucb1Q02819 459 aaKnown RBP9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Ppp6r1Q7TSI3 856 aa9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 PhaxQ9JJT9 385 aaKnown RBP9.84□□□□□ -0.83
Smarca1-203ENSMUST00000101616 Mug2P28666 1451 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ptgs1P22437 602 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Sh3bp1P55194 680 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Tbc1d8Q9Z1A9 1134 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 TmpoQ61033 693 aaKnown RBP9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Pde1cQ64338 706 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ripk4Q9ERK0 786 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ankrd26Q811D2 1581 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Irgm2A0A140LIF8 407 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Me1P06801 572 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Prpf4bQ61136 1007 aaKnown RBP9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Antxr1Q9CZ52 562 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ap3b2Q9JME5 1082 aa9.83□□□□□ -0.84
Smarca1-203ENSMUST00000101616 CenppQ9CZ92 286 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ipo7Q9EPL8 1038 aaKnown RBP9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 PogzQ8BZH4 1409 aaKnown RBP9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 BcanQ61361 883 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 LlphQ9D945 130 aaKnown RBP9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Zbtb21E9Q444 1094 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 LifrP42703 1092 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Fam163aQ8CAA5 168 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Snw1Q9CSN1 536 aaKnown RBP9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Cyp27a1Q9DBG1 533 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Znf704Q9ERQ3 566 aa9.82□□□□□ -0.84
Smarca1-203ENSMUST00000101616 A0A1L1SQF0 893 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Strn4P58404 760 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Zrsr2Q62377 462 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Anp32cQ64G17 123 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Maats1Q8BRC6 783 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ddx27Q921N6 760 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 ZwintQ9CQU5 252 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 MicalclQ9D5U9 680 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Zeb2Q9R0G7 1215 aa9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Polr1aO35134 1717 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Nap1l1P28656 391 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Cct2P80314 535 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ddx19aQ61655 478 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ccdc47Q9D024 483 aaKnown RBP9.81□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ppp1r18Q8BQ30 594 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Polr3dQ91WD1 398 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ndufa8Q9DCJ5 172 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Cnpy2Q9QXT0 182 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Zkscan16A2ALW2 728 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Frat1P70339 274 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Arglu1Q3UL36 271 aaKnown RBP9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Fchsd2Q3USJ8 740 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Exoc8Q6PGF7 716 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Dnaaf4Q8R368 420 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Il1rapl2Q9ERS6 686 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Syt10Q9R0N4 523 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Gm45015A0A140LII9 184 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Gm18336A0A140LIU8 765 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Dnajc2P54103 621 aaKnown RBP9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Bach2P97303 839 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Slc26a8Q8R0C3 999 aa9.8□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Tyro3P55144 880 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Zbtb3Q91X45 518 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Irx4Q9QY61 515 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 CenphQ9QYM8 241 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Pbrm1Q8BSQ9 1634 aaKnown RBP9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Odf2A3KGV1 830 aaKnown RBP9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 NmiO35309 314 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Map9Q3TRR0 646 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Cep112Q5PR68 954 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Rbm28Q8CGC6 750 aaKnown RBP9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Kdm4cQ8VCD7 1054 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Ccar2Q8VDP4 922 aaKnown RBP9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Naip6Q9JIB6 1403 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 ScaperF8VQ70 1398 aaKnown RBP9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 Rfx7F8VPJ6 1459 aa9.79□□□□□ -0.84
Smarca1-203ENSMUST00000101616 FanciQ8K368 1330 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms