RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Trim55G3X8Y1 545 aa7.65□□□□□ -1.18
Scn1a-201ENSMUST00000077489 TbcaP48428 108 aaKnown RBP7.65□□□□□ -1.18
Scn1a-201ENSMUST00000077489 Cep89Q9CZX2 791 aa7.65□□□□□ -1.18
Scn1a-201ENSMUST00000077489 Stxbp4Q9WV89 557 aa7.65□□□□□ -1.18
Scn1a-201ENSMUST00000077489 Fkbp4P30416 458 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gm7361D3Z6R1 267 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Btbd11Q6GQW0 1109 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Pms1Q8K119 917 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 A0A0U1RNP2 1173 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ppip5k2Q6ZQB6 1129 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Jakmip1Q8BVL9 626 aa7.65□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rapgef6Q5NCJ1 1609 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cers3Q1A3B0 383 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 ItpripQ3TNL8 555 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Tsg101Q61187 391 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Pik3r4Q8VD65 1358 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 CastP51125 788 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Slc13a4Q8BZ82 625 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Mapk8ip1Q9WVI9 707 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Zmym4A2A791 1549 aaKnown RBP7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gapvd1Q6PAR5 1458 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Abl1P00520 1123 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Trim34aQ99PP6 485 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 RalgapbQ8BQZ4 1484 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gbp4Q61107 620 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Nol12Q8BG17 217 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Eif3bQ8JZQ9 803 aaKnown RBP7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Wdr62Q3U3T8 1523 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 AI481877A2ALV5 1481 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ncoa1P70365 1447 aa7.64□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Eif5P59325 429 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Arglu1Q3UL36 271 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 GphnQ8BUV3 769 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ankrd1Q9CR42 319 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cfap53Q9D439 514 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Pik3c2gO70167 1506 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Larp1Q6ZQ58 1072 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 CenphQ9QYM8 241 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Kdm3aQ6PCM1 1323 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Apaf1O88879 1249 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gm21663A0A0G2JE01 267 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 5031410I06RikE9Q4E0 267 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gm1979E9QAN3 267 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gm5862K7N5V5 267 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Gm10220K7N660 267 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Pafah1b1P63005 410 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ripply1Q2WG77 201 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Sf3b2Q3UJB0 878 aaKnown RBP7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Tmc1Q8R4P5 757 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 OvosQ3UU35 1456 aa7.63□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Anapc15-psA0A140T8L6 141 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 NcapgE9PWG6 1004 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Igbp1bQ9QZ29 343 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cetn2Q9R1K9 172 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ankrd26Q811D2 1581 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Hvcn1Q3U2S8 269 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Prm3Q62100 101 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Bms1Q6PGF5 1284 aaKnown RBP7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Smc5Q8CG46 1101 aaKnown RBP7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Iqca1Q9CUL5 857 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ttc21bQ0HA38 1315 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Speer4bQ9D9F7 267 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Lamb3Q61087 1168 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Tacc1Q6Y685 774 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Fam13aQ8BGI4 693 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Trim11Q99PQ2 467 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Mybbp1aQ7TPV4 1344 aaKnown RBP7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Irgm2A0A140LIF8 407 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Nol8Q3UHX0 1147 aaKnown RBP7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Spty2d1Q68FG3 682 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Hook3Q8BUK6 718 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 ZwintQ9CQU5 252 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cfap69Q8BH53 942 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Tmem87bQ8BKU8 555 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Erlin1Q91X78 346 aa7.62□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rad23bP54728 416 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Traf3ip1Q149C2 625 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Fkbp5Q64378 456 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Maco1Q7TQE6 664 aaKnown RBP7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ccdc150Q8CDI7 1110 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Brf1Q8CFK2 676 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rbm5Q91YE7 815 aaKnown RBP7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Abcc5Q9R1X5 1436 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ampd3O08739 766 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cetn1P41209 172 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Tubb4aQ9D6F9 444 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Olr1Q9EQ09 363 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ddx58Q6Q899 926 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Ccdc181Q80ZU5 509 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Samm50Q8BGH2 469 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rnf41Q8BH75 317 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rbm10Q99KG3 930 aaKnown RBP7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 IkQ9Z1M8 557 aaKnown RBP7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Rprd2Q6NXI6 1469 aaKnown RBP7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Cdan1Q8CC12 1239 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Mipol1Q9D9F8 279 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Hmg20bQ9Z104 317 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Strn4P58404 760 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Nlrp3Q8R4B8 1033 aa7.61□□□□□ -1.19
Scn1a-201ENSMUST00000077489 Phlpp2Q8BXA7 1320 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms