RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Galnt12Q8BGT9 576 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Phka2Q8BWJ3 1235 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Cyp2c70Q91W64 489 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 C1qtnf2Q9D8U4 294 aa11.87□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Mfap1aC0HKD8 439 aaKnown RBP11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Mfap1bC0HKD9 439 aaKnown RBP11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Wwc1Q5SXA9 1104 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Lrig3Q6P1C6 1117 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Il27Q8K3I6 234 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Vmn1r199Q8R280 367 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Bap1Q99PU7 728 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Sept3Q9Z1S5 350 aa11.86□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 CltaO08585 235 aa11.85□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Sytl5Q80T23 753 aa11.85□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Phf20l1Q8CCJ9 1013 aa11.85□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Mettl16Q9CQG2 553 aaKnown RBP11.85□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Stau1Q9Z108 487 aaKnown RBP11.85□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 P01646 108 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Mbl1P39039 239 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 VegfbP49766 207 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Card10P58660 1021 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Pip5k1aP70182 546 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Gtdc1Q8BW56 445 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Hyal3Q8VEI3 412 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Trim33Q99PP7 1142 aa11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Add1Q9QYC0 735 aaKnown RBP11.84□□□□□ -0.51
Ccdc54-201ENSMUST00000062439 Map3k13Q1HKZ5 959 aa11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Tbc1d32Q3URV1 1296 aa11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 SkiQ60698 725 aa11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Prpf38bQ80SY5 542 aaKnown RBP11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Ubp1Q811S7 540 aa11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Sart1Q9Z315 806 aaKnown RBP11.83□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Pramef25A2ASI9 494 aa11.82□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Cdk2ap1O35207 114 aa11.82□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Ap4e1Q80V94 1122 aa11.82□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Clp1Q99LI9 425 aa11.81□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Baz1aO88379 1555 aa11.8□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Gja8P28236 440 aa11.8□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Ptk7Q8BKG3 1062 aa11.8□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Ppp4r3bQ922R5 820 aa11.8□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Wnt8bQ9WUD6 350 aa11.8□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 PdgfrbP05622 1098 aa11.79□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Cluap1Q8R3P7 413 aa11.79□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Pcdhb2Q91Y00 799 aa11.79□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Hcls1P49710 486 aaKnown RBP11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 HrkP62816 92 aa11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Tmcc2Q80W04 706 aa11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Frmd6Q8C0V9 622 aa11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Psma6Q9QUM9 246 aa11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 Tex21Q9R0U9 575 aa11.78□□□□□ -0.52
Ccdc54-201ENSMUST00000062439 EomesO54839 707 aa11.77□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Tbx1P70323 479 aa11.77□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Epha4Q03137 986 aa11.76□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Sumf1Q8R0F3 372 aa11.76□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Cap2Q9CYT6 476 aa11.76□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Cd63P41731 238 aa11.75□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Jmjd4Q8BFT6 427 aa11.75□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Crybg2B7ZCC2 1516 aa11.75□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 UprtB1AVZ0 310 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Gtf3c3Q3TMP1 882 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Mon1aQ6PDG8 556 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Rhox8Q6VSS7 320 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Fam13aQ8BGI4 693 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Ms4a4dQ99N05 225 aa11.74□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Rhox1B1APN4 224 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Hoxa10P31310 416 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Nrsn1P97799 196 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Lrfn1Q2WF71 766 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Gjd4Q8BSD4 364 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Ddx27Q921N6 760 aaKnown RBP11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Adam26aQ9R158 697 aa11.73□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Gm21663A0A0G2JE01 267 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 DgkiD3YWQ0 1071 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 5031410I06RikE9Q4E0 267 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Gm5862K7N5V5 267 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Gm10220K7N660 267 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Impdh2P24547 514 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Kiaa0319Q5SZV5 1081 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Ogfod3Q9D136 315 aa11.72□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 EgfrQ01279 1210 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Prdm6Q3UZD5 596 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Fam196bQ6GQV1 535 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Olfr761Q7TRJ0 323 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 V1ra11Q8R2E6 318 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Ccer1Q9CQL2 403 aa11.71□□□□□ -0.53
Ccdc54-201ENSMUST00000062439 Zfp735B1ARH2 734 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 AvpP35455 168 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Fam198aQ3UY90 562 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Pcdhga7Q6DD96 935 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Amer1Q7TS75 1132 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Chmp7Q8R1T1 451 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Galntl5Q9D4M9 431 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Magea2Q9R2A2 320 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Serpinb6cW4VSP4 379 aa11.7□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Gm3264L7N2C5 238 aa11.69□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Bmp2P21274 394 aa11.69□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Aldh2P47738 519 aaKnown RBP11.69□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 MpripP97434 1024 aa11.69□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Nme2Q01768 152 aa11.69□□□□□ -0.54
Ccdc54-201ENSMUST00000062439 Fuca1Q99LJ1 452 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29.5 ms