RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 AnkarA2RT91 1465 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Duxf3A0A0N4SV92 674 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Trim34bJ3QNR8 485 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 ImpactO55091 318 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Dixdc1Q80Y83 711 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nol8Q3UHX0 1147 aaKnown RBP12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Zeb2Q9R0G7 1215 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 TimelessQ9R1X4 1197 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Fam135bQ9DAI6 1403 aa12.24□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Agtpbp1Q641K1 1218 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 SrrtQ99MR6 875 aaKnown RBP12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gm21680A0A0G2JGR8 267 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Rrp9Q91WM3 475 aaKnown RBP12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Map7d2A2AG50 781 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ccne1Q61457 408 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Lrrcc1Q69ZB0 1026 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Gli2Q0VGT2 1544 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 FosbP13346 338 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 LifrP42703 1092 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Stk38Q91VJ4 465 aa12.23□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Pip4k2bQ80XI4 416 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nol11Q8BJW5 723 aaKnown RBP12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 ImmtQ8CAQ8 757 aaKnown RBP12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Lrrc7Q80TE7 1490 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 AlkP97793 1621 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Cdkn1cP49919 348 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Ccdc34Q3UI66 367 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Brf1Q8CFK2 676 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Mical1Q8VDP3 1048 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Astn2Q80Z10 1352 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Fhod3Q76LL6 1578 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Fkbp5Q64378 456 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Cdc45Q9Z1X9 566 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Uggt2E9Q4X2 1504 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Cdkl5Q3UTQ8 938 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Tbc1d9Q3UYK3 1264 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Nup88Q8CEC0 753 aaKnown RBP12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Tomm22Q9CPQ3 142 aa12.22□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Map3k13Q1HKZ5 959 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Smarca5Q91ZW3 1051 aaKnown RBP12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 TnmdQ9EP64 317 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Znf518aB2RRF6 1478 aaKnown RBP12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Naip7Q9JIB3 1402 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 SetQ9EQU5 289 aaKnown RBP12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Kdm2bQ6P1G2 1309 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Wdr78E9PYY5 807 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Terf2O35144 541 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Strn4P58404 760 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Cnnm3Q32NY4 713 aa12.21□□□□□ -0.45
Ccdc40-201ENSMUST00000035935 Riok1Q922Q2 567 aa12.21□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Zmym3Q9JLM4 1370 aa12.21□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Dennd4bQ3U1Y4 1499 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Ehmt1Q5DW34 1296 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Olfml1Q8BSH2 233 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Eif4g3Q80XI3 1579 aaKnown RBP12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Frmpd2A0A140LI67 1392 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rbm27Q5SFM8 1060 aaKnown RBP12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Gcom1E9PZ54 550 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 MyzapQ3UIJ9 466 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Ddx58Q6Q899 926 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rbm28Q8CGC6 750 aaKnown RBP12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Echdc1Q9D9V3 322 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rsph6aQ8CDR2 708 aa12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Prrc2bQ7TPM1 1486 aaKnown RBP12.2□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Mcm4P49717 862 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Cers3Q1A3B0 383 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Krt84Q99M73 603 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Cfap58B2RW38 873 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Aldh8a1Q8BH00 487 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Aldh1l2Q8K009 923 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Tex14Q7M6U3 1450 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Fam208aQ69ZR9 1610 aaKnown RBP12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Irgm2A0A140LIF8 407 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Washc4Q3UMB9 1173 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Slc26a8Q8R0C3 999 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Trim34aQ99PP6 485 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Gjb2Q00977 226 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Mctp2Q5RJH2 878 aa12.19□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Irf9Q61179 399 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rad17Q6NXW6 688 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Tmem87bQ8BKU8 555 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rufy2Q8R4C2 606 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Rapgef4Q9EQZ6 1011 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Efcab6Q6P1E8 1516 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Ttc19Q8CC21 365 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Bag3Q9JLV1 577 aaKnown RBP12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Znhit6Q3UFB2 460 aaKnown RBP12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Gm16486A0A1D5RMD1 1434 aa12.18□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Chpf2Q3UU43 768 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 AatkQ80YE4 1365 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Lamc1P02468 1607 aaKnown RBP12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Scaf1Q5U4C3 1256 aaKnown RBP12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Trim27Q62158 513 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Fsd1Q7TPM6 496 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Bcl11bQ99PV8 884 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Pmfbp1Q9WVQ0 1022 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Kiaa1551Q5DTW7 1521 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Brd1E9PZ26 1189 aaKnown RBP12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Cavin1O54724 392 aa12.17□□□□□ -0.46
Ccdc40-201ENSMUST00000035935 Wasf1Q8R5H6 559 aa12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 122.1 ms