RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Suz12Q80U70 741 aaKnown RBP6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Calr3Q9D9Q6 380 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Fam155bA2BDP1 471 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 PtprcP06800 1291 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Pde3bQ61409 1100 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Plpp6Q9D4F2 292 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Magea2Q9R2A2 320 aa6.85□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gm3147A0A0J9YU88 481 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gm10424A0A0J9YVD0 481 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 Ankrd34aB2RW11 495 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 Gm7971J3QMM8 481 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 TaglnP37804 201 aaKnown RBP6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 BC061212Q6P8K3 481 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 A430089I19RikQ8C9W1 407 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 Ccer1Q9CQL2 403 aa6.84□□□□□ -1.31
Clk1-201ENSMUST00000034868 Jade2Q6ZQF7 829 aa6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Srek1Q8BZX4 494 aaKnown RBP6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Fermt3Q8K1B8 665 aa6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Spire2Q8K1S6 718 aa6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 HdlbpQ8VDJ3 1268 aaKnown RBP6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Fam212aQ9CX62 282 aa6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Mecp2Q9Z2D6 484 aaKnown RBP6.83□□□□□ -1.32
Clk1-201ENSMUST00000034868 Dmrtb1A2A9I7 359 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 LmnaP48678 665 aaKnown RBP6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Cpa6Q5U901 438 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Tmem134Q8R0J4 195 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Cmtr1Q9DBC3 837 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Gm7347D3YYI9 267 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 PtgdrP70263 357 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Tgif2Q8C0Y1 237 aa6.82□□□□□ -1.32
Clk1-201ENSMUST00000034868 Lrrc32G3XA59 663 aa6.81□□□□□ -1.32
Clk1-201ENSMUST00000034868 ZfrO88532 1074 aaKnown RBP6.81□□□□□ -1.32
Clk1-201ENSMUST00000034868 Gspt2Q149F3 632 aa6.81□□□□□ -1.32
Clk1-201ENSMUST00000034868 Larp1Q6ZQ58 1072 aaKnown RBP6.81□□□□□ -1.32
Clk1-201ENSMUST00000034868 Serbp1Q9CY58 407 aaKnown RBP6.81□□□□□ -1.32
Clk1-201ENSMUST00000034868 SarsP26638 512 aaKnown RBP6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 EgfrQ01279 1210 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Ccdc69Q3TCJ8 202 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Smyd5Q3TYX3 416 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Cracr2aQ3UP38 310 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Dusp4Q8BFV3 398 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Pdcl3Q8BVF2 240 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Cuedc1Q8R3V6 388 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Ms4a4cQ9D3F6 226 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Mmp16Q9WTR0 607 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Prss12O08762 761 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Parp2O88554 559 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 LdhbP16125 334 aaKnown RBP6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Dhx37Q6NZL1 1150 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Tex21Q9R0U9 575 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Stk11Q9WTK7 436 aa6.8□□□□□ -1.32
Clk1-201ENSMUST00000034868 Mphosph9A6H5Y1 991 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Zc3h12bG3X9I7 835 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Irf1P15314 329 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Foxk2Q3UCQ1 651 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Rnf20Q5DTM8 973 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Cnpy4Q8BQ47 245 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Gm17324Q8C6J8 137 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 ParnQ8VDG3 624 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Mapk8Q91Y86 384 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 4931400O07RikQ9D4M5 137 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 DmgdhQ9DBT9 869 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 Col4a3bpQ9EQG9 624 aa6.79□□□□□ -1.32
Clk1-201ENSMUST00000034868 MsmpB1AWI6 139 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Trim30cD3YVI9 513 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Xirp1O70373 1129 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Kcnn2P58390 839 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Dusp27Q148W8 1138 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Tnni3kQ5GIG6 834 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Pcdhga7Q6DD96 935 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Nop58Q6DFW4 536 aaKnown RBP6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Il27Q8K3I6 234 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Col26a1Q91VF6 440 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Gtf2a1Q99PM3 378 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Lce1mQ9CR91 182 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Mtmr2Q9Z2D1 643 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 Baz1bQ9Z277 1479 aa6.78□□□□□ -1.32
Clk1-201ENSMUST00000034868 A0A1Y7VLE6 161 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Slc30a10Q3UVU3 470 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Frmd6Q8C0V9 622 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Hyal3Q8VEI3 412 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Havcr2Q8VIM0 281 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Capn12Q9ER56 720 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Rb1cc1Q9ESK9 1588 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Fyb2A2A995 729 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Cd19P25918 547 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Slc16a10Q3U9N9 512 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Fam198aQ3UY90 562 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 Gm11487Q5RIS0 354 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 GrhprQ91Z53 328 aa6.77□□□□□ -1.33
Clk1-201ENSMUST00000034868 CadpsQ80TJ1 1355 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Grem1O70326 184 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Clec11aO88200 328 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 KitP05532 979 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Nek10Q3UGM2 1111 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Pif1Q80SX8 650 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Dnajc22Q8CHS2 339 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Mei1Q9D4I2 1268 aa6.76□□□□□ -1.33
Clk1-201ENSMUST00000034868 Pacs2Q3V3Q7 862 aa6.75□□□□□ -1.33
Clk1-201ENSMUST00000034868 Tmem40Q4FJU9 225 aa6.75□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms