RNA–Protein interactions for RNA: ENSMUST00000033012.8

Copb1-201, Transcript of Coatomer subunit beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Copb1, Length 3,346 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1-201ENSMUST00000033012 Utp3Q9JI13 469 aaKnown RBP12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ercc6F8VPZ5 1481 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Abcc2Q8VI47 1543 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Pdia3P27773 505 aaKnown RBP12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Aldh8a1Q8BH00 487 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Nol11Q8BJW5 723 aaKnown RBP12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Otud6bQ8K2H2 294 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Chaf1aQ9QWF0 911 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Tdrd9Q14BI7 1383 aa12.05□□□□□ -0.48
Copb1-201ENSMUST00000033012 Apaf1O88879 1249 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Spag9Q58A65 1321 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Med14A2ABV5 1459 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Scaf11E9PZM7 1456 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Uggt2E9Q4X2 1504 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Rtf1A2AQ19 715 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Trim27Q62158 513 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Rai14Q9EP71 979 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Rtel1Q0VGM9 1203 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 St18Q80TY4 1045 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Rassf4Q8CB96 322 aa12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ccar2Q8VDP4 922 aaKnown RBP12.04□□□□□ -0.48
Copb1-201ENSMUST00000033012 Kansl3A2RSY1 903 aaKnown RBP12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Zkscan4Q5SZT6 480 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ccdc60Q8C4J0 545 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Med4Q9CQA5 270 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ankrd50F7BE84 1390 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Cep152A2AUM9 1736 aaKnown RBP12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Zkscan16A2ALW2 728 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Brpf3B2KF05 1204 aaKnown RBP12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 EcsitQ9QZH6 435 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Klra1P20937 262 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ctr9Q62018 1173 aaKnown RBP12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Ccz1Q8C1Y8 480 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 Cchcr1Q8K2I2 770 aa12.03□□□□□ -0.48
Copb1-201ENSMUST00000033012 PxdnQ3UQ28 1475 aa12.02□□□□□ -0.48
Copb1-201ENSMUST00000033012 Fancd2Q80V62 1450 aa12.02□□□□□ -0.48
Copb1-201ENSMUST00000033012 Zscan22Q8BGS5 496 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Irx5Q9JKQ4 484 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Talpid3E9PV87 1520 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Edc4Q3UJB9 1406 aaKnown RBP12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 NinlQ6ZQ12 1394 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Zkscan7E9PVW1 718 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Gcc1Q9D4H2 778 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 AknaQ80VW7 1404 aa12.02□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ehbp1l1Q99MS7 1716 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Speer4f2E9Q366 295 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Mcm2P97310 904 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ice2Q3UZ18 988 aaKnown RBP12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Znf771Q8BJ90 317 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Atp6v1dP57746 247 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 G3bp1P97855 465 aaKnown RBP12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Utp14aQ640M1 767 aaKnown RBP12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Nutm1Q8BHP2 1126 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Tmx4Q8C0L0 335 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Prex2Q3LAC4 1598 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ube2hP62257 183 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Aldh1l1Q8R0Y6 902 aa12.01□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ubn2Q80WC1 1314 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ankrd44B2RXR6 993 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Tpm1P58771 284 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Anp32eP97822 260 aaKnown RBP12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Wdr93Q402B2 695 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 TfrcQ62351 763 aaKnown RBP12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Dixdc1Q80Y83 711 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Add3Q9QYB5 706 aaKnown RBP12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Golga5Q9QYE6 729 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Psen1P49769 467 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Cpa2Q504N0 417 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Cep135Q6P5D4 1140 aa12□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ap5z1Q3U829 807 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Eif4g2Q62448 906 aaKnown RBP11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Filip1lQ6P6L0 1131 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Pik3r4Q8VD65 1358 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Skint5A7XUY5 1461 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 MycnP03966 462 aaKnown RBP11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Usp25P57080 1055 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Samm50Q8BGH2 469 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ccdc38Q8CDN8 563 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 LlphQ9D945 130 aaKnown RBP11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 H2afxP27661 143 aaKnown RBP11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Hecw1Q8K4P8 1604 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Magi1Q6RHR9 1471 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Robo2Q7TPD3 1470 aa11.99□□□□□ -0.49
Copb1-201ENSMUST00000033012 Abca16E9PWJ7 1678 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Uhrf1bp1B2KF50 1429 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Dnmt1P13864 1620 aaKnown RBP11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Kif3cO35066 796 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Mmp14P53690 582 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Pcmtd1P59913 357 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Mum1Q6DID5 682 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Frmd3Q8BHD4 595 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ift57Q8BXG3 429 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Mast1Q9R1L5 1570 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Rfc1P35601 1131 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Q3UPC7 1272 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Nol10Q5RJG1 687 aaKnown RBP11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Ttc27Q8CD92 847 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Nsd3Q6P2L6 1439 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Paxbp1P58501 919 aa11.98□□□□□ -0.49
Copb1-201ENSMUST00000033012 Fam163aQ8CAA5 168 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms