RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 TchpQ3TVW5 497 aa16.21■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Znf710Q3U288 666 aa16.21■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Zfp853A0A1D5RM95 733 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Zhx1P70121 873 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Smg7Q5RJH6 1138 aaKnown RBP16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ppp6r1Q7TSI3 856 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Sirt1Q923E4 737 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Bcl2l13P59017 434 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Hvcn1Q3U2S8 269 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Golim4Q8BXA1 655 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Syap1Q9D5V6 365 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Gbp7Q91Z40 638 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 4933428M09RikQ9D3X3 192 aa16.2■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Sdccag8Q80UF4 717 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Soga1E1U8D0 1418 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ccdc42Q5SV66 316 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Cfap57Q9D180 1249 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Gm21680A0A0G2JGR8 267 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Abcf1Q6P542 837 aaKnown RBP16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 DesP31001 469 aaKnown RBP16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ncbp1Q3UYV9 790 aaKnown RBP16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Clul1Q3ZRW6 464 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Fez2Q6TYB5 348 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Wasf1Q8R5H6 559 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Nap1l5Q9JJF0 156 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Kdm4aQ8BW72 1064 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Gtf3c5Q8R2T8 520 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Cdr1E9Q0B4 517 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Nol8Q3UHX0 1147 aaKnown RBP16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Apol7cQ8C6E1 369 aa16.19■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Shroom4Q1W617 1475 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 LrpprcQ6PB66 1392 aaKnown RBP16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Zfp42P22227 288 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 ZfxP17012 799 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Atf3Q60765 181 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Stard3nlQ9DCI3 235 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Smarcc1P97496 1104 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Krt84Q99M73 603 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Kif18aQ91WD7 886 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Pdcl2Q78Y63 240 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Rab3il1Q8VDV3 383 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Hsf2bpQ9D4G2 338 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Iqgap2Q3UQ44 1575 aa16.18■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Psmd1Q3TXS7 953 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Znf131Q8K3J5 619 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Washc2Q6PGL7 1334 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ankrd24Q80VM7 985 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Fsd2Q8BZ52 692 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 TatQ8QZR1 454 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Wdr63B2RY71 923 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Vgll3P85442 326 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Smco2Q9DA21 347 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Top2aQ01320 1528 aaKnown RBP16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Fam107bQ3TGF2 131 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Nop53Q8BK35 484 aaKnown RBP16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ccdc158Q8CDI6 1109 aa16.17■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Tsg101Q61187 391 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Rbm5Q91YE7 815 aaKnown RBP16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Tdrd9Q14BI7 1383 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ccdc6D3YZP9 469 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ctnna2Q61301 953 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ccdc172Q810N9 267 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Srgap3Q812A2 1099 aa16.16■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Sass6Q80UK7 654 aa16.15■□□□□ 0.18
Col5a1-201ENSMUST00000028280 NinlQ6ZQ12 1394 aa16.15■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Ppp2r1aQ76MZ3 589 aa16.15■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Lman1Q9D0F3 517 aa16.15■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Cog6Q8R3I3 657 aa16.14■□□□□ 0.18
Col5a1-201ENSMUST00000028280 Efcab5A0JP43 1406 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Myom3A2ABU4 1439 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Tacc1Q6Y685 774 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Ddx58Q6Q899 926 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Dnajc2P54103 621 aaKnown RBP16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Hook3Q8BUK6 718 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Rcan3Q9JKK0 239 aa16.14■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Zfp444Q3TDV8 331 aaKnown RBP16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gas2l3Q3UWW6 683 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Olr1Q9EQ09 363 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Stxbp4Q9WV89 557 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Akap2O54931 893 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Tex35Q14BK3 207 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Spty2d1Q68FG3 682 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gle1Q8R322 699 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gsdma2Q32M21 443 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Fam13aQ8BGI4 693 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Puf60Q3UEB3 564 aaKnown RBP16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Camk4P08414 469 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cnksr2Q80YA9 1032 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Pms1Q8K119 917 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Galntl5Q9D4M9 431 aa16.13■□□□□ 0.17
Col5a1-201ENSMUST00000028280 NmiO35309 314 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Brms1Q99N20 246 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Snw1Q9CSN1 536 aaKnown RBP16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Prdm16A2A935 1275 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Gse1Q3U3C9 1213 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Trim34bJ3QNR8 485 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cnnm1Q0GA42 951 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Cd109Q8R422 1442 aa16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Ppp1r9bQ6R891 817 aaKnown RBP16.12■□□□□ 0.17
Col5a1-201ENSMUST00000028280 Riok1Q922Q2 567 aa16.12■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms