RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Qser1A2BIE1 1698 aa14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Map7d2A2AG50 781 aa14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Swt1Q9DBQ9 907 aa14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Naip7Q9JIB3 1402 aa14.07□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Sipa1l1Q8C0T5 1782 aa14.06□□□□□ -0.16
Sdc1-201ENSMUST00000020911 CltcQ68FD5 1675 aaKnown RBP14.06□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Trim30aP15533 496 aa14.06□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Stk11ipQ3TAA7 1072 aa14.06□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Ubap1lG3UW59 384 aa14.05□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Map4k4P97820 1233 aaKnown RBP14.05□□□□□ -0.16
Sdc1-201ENSMUST00000020911 HnrnpmQ9D0E1 729 aaKnown RBP14.05□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Mctp2Q5RJH2 878 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 MaddQ80U28 1577 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Rasa1E9PYG6 1038 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Znf330Q922H9 316 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Chd1lQ9CXF7 900 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Adamts7Q68SA9 1657 aa14.04□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Arhgap23Q69ZH9 1483 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Ttc41Q692V3 1318 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Lcmt1A0A0U1RNF2 332 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 NmiO35309 314 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 MyclP10166 368 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Zbtb38Q3LR78 1197 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 GorabQ8BRM2 368 aa14.03□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Anp32cQ64G17 123 aa14.02□□□□□ -0.16
Sdc1-201ENSMUST00000020911 Dync1i1O88485 628 aa14.02□□□□□ -0.17
Sdc1-201ENSMUST00000020911 E4f1Q8CCE9 783 aa14.02□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Gtf3c6Q9D8P7 227 aa14.02□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Slc12a5Q91V14 1138 aa14.02□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Tfip11Q9ERA6 838 aaKnown RBP14.02□□□□□ -0.17
Sdc1-201ENSMUST00000020911 ScaperF8VQ70 1398 aaKnown RBP14.01□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Ncbp3Q8BZR9 615 aaKnown RBP14.01□□□□□ -0.17
Sdc1-201ENSMUST00000020911 PalmQ9Z0P4 383 aa14.01□□□□□ -0.17
Sdc1-201ENSMUST00000020911 4930548H24RikQ9D496 437 aa14□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Kif13aQ9EQW7 1749 aa14□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Map3k19E9Q3S4 1311 aa14□□□□□ -0.17
Sdc1-201ENSMUST00000020911 IghaA0A0A6YXW6 389 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Bach2P97303 839 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Irx4Q9QY61 515 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Frmd3Q8BHD4 595 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Olfml1Q8BSH2 233 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Tmx1Q8VBT0 278 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Irx5Q9JKQ4 484 aa13.99□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Pwp2Q8BU03 919 aaKnown RBP13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 AatfQ9JKX4 526 aaKnown RBP13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Map7O88735 730 aa13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Mcm10Q0VBD2 885 aa13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Ccar1Q8CH18 1146 aaKnown RBP13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Card6E9PWH2 1175 aa13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Aplp1Q03157 653 aa13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Sh3bp5Q9Z131 463 aa13.97□□□□□ -0.17
Sdc1-201ENSMUST00000020911 ImpactO55091 318 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Ano8Q6PB70 1060 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Fez2Q6TYB5 348 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Tmco5bQ80X59 307 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Ccdc60Q8C4J0 545 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Cc2d1aQ8K1A6 943 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Trim58Q5NCC9 485 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Ppp1r3fQ9JIG4 799 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Eif2ak4Q9QZ05 1648 aa13.96□□□□□ -0.17
Sdc1-201ENSMUST00000020911 Tbc1d31Q6NXY1 996 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Nutm1Q8BHP2 1126 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Cog6Q8R3I3 657 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Gm45140A0A0N4SUM8 220 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Ppp6r1Q7TSI3 856 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Phlpp2Q8BXA7 1320 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Ift172Q6VH22 1749 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Glipr1l2Q9CQ35 332 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Arhgef28P97433 1693 aa13.95□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Gadd45bP22339 160 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Lrriq3Q14DL3 633 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 U2surpQ6NV83 1029 aaKnown RBP13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Kdm4aQ8BW72 1064 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Cavin4A2AMM0 362 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Rbm25B2RY56 838 aaKnown RBP13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Ccdc34Q3UI66 367 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Phf20l1Q8CCJ9 1013 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 SrrtQ99MR6 875 aaKnown RBP13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Abca14E9Q8F8 1683 aa13.94□□□□□ -0.18
Sdc1-201ENSMUST00000020911 1700019A02RikA0A087WPV9 146 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Casq1O09165 405 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Dnajc2P54103 621 aaKnown RBP13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Ice2Q3UZ18 988 aaKnown RBP13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 KdrP35918 1367 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Nrxn1Q9CS84 1514 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Igsf3Q6ZQA6 1194 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Irx6Q9ER75 438 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 OptnQ8K3K8 584 aa13.93□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Itsn1Q9Z0R4 1714 aa13.92□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Gm10093D3YYI8 482 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Hdac1O09106 482 aaKnown RBP13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Rtel1Q0VGM9 1203 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Hvcn1Q3U2S8 269 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Ddx41Q91VN6 622 aaKnown RBP13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Cabp2Q9JLK4 216 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Psen1P49769 467 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Cdkn1cP49919 348 aa13.91□□□□□ -0.18
Sdc1-201ENSMUST00000020911 MpripP97434 1024 aa13.9□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Kif18aQ91WD7 886 aa13.9□□□□□ -0.18
Sdc1-201ENSMUST00000020911 Med14A2ABV5 1459 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms