RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 EIF2B4Q9UI10 523 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 ZNF490Q9ULM2 529 aaPredicted RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 RBM47A0AV96 593 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 ELOVL7A1L3X0 281 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CAPN14A8MX76 684 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 NT5C1B-RDH14C9J2C7 533 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 J3KR12 359 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 ARHGEF9O43307 516 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 STK16O75716 305 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CNMDO75829 334 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 SIX3O95343 332 aaPredicted RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CAPN1P07384 714 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CAPGP40121 348 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 MTHFRP42898 656 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 EEFSECP57772 596 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 GTF2H2Q13888 395 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CCNIQ14094 377 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 NADK2Q4G0N4 442 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 GTF2H2CQ6P1K8 395 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 PAQR3Q6TCH7 311 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CPNE9Q8IYJ1 553 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 TMEM130Q8N3G9 435 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 TCAIMQ8N3R3 496 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 C2orf15Q8WU43 125 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 LRRC58Q96CX6 371 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 PANX1Q96RD7 426 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 RBM4BQ9BQ04 359 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 RBM4Q9BWF3 364 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 CCNB1IP1Q9NPC3 277 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 SPG21Q9NZD8 308 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 SAMD4AQ9UPU9 718 aaKnown RBP8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 SCML2Q9UQR0 700 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 SLX4Q8IY92 1834 aa8.53□□□□□ -1.04
HNRNPU-219ENST00000639628 GLYATL1P3A0A0U1RQE8 302 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 ZBTB42B2RXF5 422 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 SCAMP3O14828 347 aaKnown RBP8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 CBFA2T3O75081 653 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 CKMT2P17540 419 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 GPC1P35052 558 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 ATP4BP51164 291 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 AP1S1P61966 158 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 HPCAP84074 193 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 DGCR6Q14129 220 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 PAGE2BQ5JRK9 111 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 FUT10Q6P4F1 479 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 CCDC103Q8IW40 242 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 DCBLD1Q8N8Z6 715 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 BBS2Q9BXC9 721 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 CXorf21Q9HAI6 301 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.04
HNRNPU-219ENST00000639628 ZCWPW2A0A1B0GU75 182 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 MOXD2PA6NHM9 499 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SDHDO14521 159 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 RGS5O15539 181 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SCELO95171 688 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 MED26O95402 600 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 HSMCR30P0CW71 290 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ATN1P54259 1190 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 MERTKQ12866 999 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ITGADQ13349 1161 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CCL14Q16627 93 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CCNYL2Q5T2Q4 361 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ARMCX6Q7L4S7 300 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF605Q86T29 641 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 HIPK1Q86Z02 1210 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZBTB2Q8N680 514 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SIDT2Q8NBJ9 832 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 GLB1L3Q8NCI6 653 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 SMG8Q8ND04 991 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 PLD4Q96BZ4 506 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 C8orf48Q96LL4 319 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 C1orf74Q96LT6 269 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZNF558Q96NG5 402 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 LRRC3Q9BY71 257 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ROGDIQ9GZN7 287 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 H2AFY2Q9P0M6 372 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 PADI4Q9UM07 663 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 FAM220BPB1ANY3 271 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 PRAMEF1O95521 474 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 FTH1P02794 183 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 PPIBP23284 216 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CCR10P46092 362 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 LEPRP48357 1165 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 HSPA7P48741 367 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TRAF3Q13114 568 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TP53BP2Q13625 1128 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ZC3H12BQ5HYM0 836 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 YAF2Q8IY57 180 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 PGAP3Q96FM1 320 aaPredicted RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TMEM209Q96SK2 561 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 AARSD1Q9BTE6 412 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 TMEM248Q9NWD8 314 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ADAMTS6Q9UKP5 1117 aa8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 RNASEH1O60930 286 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 CNPP09543 421 aaKnown RBP8.52□□□□□ -1.05
HNRNPU-219ENST00000639628 ACADVLP49748 655 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms