RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 VRTNQ9H8Y1 702 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ATAD3AQ9NVI7 634 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 THG1LQ9NWX6 298 aaKnown RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 RSL24D1Q9UHA3 163 aaKnown RBP14.32□□□□□ -0.12
SCARB2-216ENST00000639300 RPS6KA6Q9UK32 745 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 TLR6Q9Y2C9 796 aa14.32□□□□□ -0.12
SCARB2-216ENST00000639300 ERAL1O75616 437 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 EOMESO95936 686 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 HCAR3P49019 387 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 GALNT2Q10471 571 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 INTS11Q5TA45 600 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 AADATQ8N5Z0 425 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 STARD8Q92502 1023 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PNPLA8Q9NP80 782 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 MYH1P12882 1939 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 SLC38A8A6NNN8 435 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 SLC9A3R1O14745 358 aaPredicted RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PABPC1P11940 636 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CYP4F2P78329 520 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PURAQ00577 322 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CYP4F3Q08477 520 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CLP1Q92989 425 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 AARSD1Q9BTE6 412 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 RHBGQ9H310 441 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 COQ10BQ9H8M1 238 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PALMDQ9NP74 551 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 MAGEL2Q9UJ55 1249 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 MEIS3P2A8K0S8 358 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 DNAJA2O60884 412 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PRDX6P30041 224 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 KIR3DL1P43629 444 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PRKCQQ04759 706 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CACNG1Q06432 222 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PCLAFQ15004 111 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CCDC88AQ3V6T2 1871 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 ATAD3BQ5T9A4 648 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 TMEM214Q6NUQ4 689 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 ASZ1Q8WWH4 475 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 DPF3Q92784 378 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 TADA1Q96BN2 335 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 ITCHQ96J02 903 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 SUSD3Q96L08 255 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 CCDC3Q9BQI4 270 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 NLNQ9BYT8 704 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 KCTD5Q9NXV2 234 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 GALPQ9UBC7 116 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 IGKV6-21A0A0C4DH24 114 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 SGTAO43765 313 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 ALDOAP04075 364 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 ITGAXP20702 1163 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 GRB14Q14449 540 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PLEKHG4Q58EX7 1191 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PERM1Q5SV97 790 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 GALNT5Q7Z7M9 940 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 GPR22Q99680 433 aa14.31□□□□□ -0.12
SCARB2-216ENST00000639300 TSEN34Q9BSV6 310 aaKnown RBP14.31□□□□□ -0.12
SCARB2-216ENST00000639300 IGKV6D-21A0A0A0MT36 114 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 E7ESA3 106 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 UROSP10746 265 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 ALOX12P18054 663 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 MRPL28Q13084 256 aaKnown RBP14.3□□□□□ -0.12
SCARB2-216ENST00000639300 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 MSANTD2Q6P1R3 559 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 NPAS4Q8IUM7 802 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 PLEKHG4BQ96PX9 1271 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 TXLNGYQ9BZA5 131 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 SIRPGQ9P1W8 387 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 EDN1P05305 212 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 SPAM1P38567 509 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 EMC10Q5UCC4 262 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 MBLAC2Q68D91 279 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 C14orf80Q86SX3 495 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 ZBTB2Q8N680 514 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 ZNF557Q8N988 423 aaPredicted RBP14.3□□□□□ -0.12
SCARB2-216ENST00000639300 OR10A6Q8NH74 314 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 NELL1Q92832 810 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 RAB23Q9ULC3 237 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 KIAA0100Q14667 2235 aaKnown RBP14.3□□□□□ -0.12
SCARB2-216ENST00000639300 NR4A1P22736 598 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 TGM3Q08188 693 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 CXorf40AQ8TE69 158 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 VPS35Q96QK1 796 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 PAAF1Q9BRP4 392 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 RASSF1Q9NS23 344 aa14.3□□□□□ -0.12
SCARB2-216ENST00000639300 G3V2T6 193 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 ABLIM1O14639 778 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 GLUD1P00367 558 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 ESR1P03372 595 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 RPN2P04844 631 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 ACADMP11310 421 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 MTHFRP42898 656 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 MTPNP58546 118 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CLDN10P78369 228 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 MOGSQ13724 837 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms