RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 GJB3O75712 270 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SOAT2O75908 522 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 NCK1P16333 377 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 TPP2P29144 1249 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 HMOX2P30519 316 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 POLR2JP52435 117 aaKnown RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 EFEMP1Q12805 493 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 TSNQ15631 228 aaKnown RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SETMARQ53H47 684 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SERINC5Q86VE9 423 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 MAGEE2Q8TD90 523 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 COG8Q96MW5 612 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SLC30A3Q99726 388 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 MTG1Q9BT17 334 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 POLR1BQ9H9Y6 1135 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 MED16Q9Y2X0 877 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 PLXNA3P51805 1871 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 ZFC3H1O60293 1989 aaKnown RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 H0YAE9 185 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 MUSKO15146 869 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 KLK8O60259 260 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 CBFA2T3O75081 653 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 ATE1O95260 518 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 ENO2P09104 434 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 CD52P31358 61 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 UFM1P61960 85 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 ERVK-8P63133 956 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 TRIP4Q15650 581 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 FUT11Q495W5 492 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 SYVN1Q86TM6 617 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 FUBP1Q96AE4 644 aaKnown RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 C8orf48Q96LL4 319 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 TUBA1CQ9BQE3 449 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 BDH2Q9BUT1 245 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 NLE1Q9NVX2 485 aaPredicted RBP19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 GMIPQ9P107 970 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 FAM50BQ9Y247 325 aa19.96■□□□□ 0.79
SYNGAP1-227ENST00000638142 GRXCR2A6NFK2 248 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 MOXD2PA6NHM9 499 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 F8W810 466 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 NDST3O95803 873 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 C1RP00736 705 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 SERPINF2P08697 491 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 HLCSP50747 726 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 ADARB1P78563 741 aaKnown RBP19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 EMX2Q04743 252 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 CCNYL2Q5T2Q4 361 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 SDHAF4Q5VUM1 108 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 NANOGP8Q6NSW7 305 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 NKAPQ8N5F7 415 aaKnown RBP19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 FUBP3Q96I24 572 aaKnown RBP eCLIP19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 VPS50Q96JG6 964 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 CNDP2Q96KP4 475 aaKnown RBP19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 RPRD1AQ96P16 312 aaPredicted RBP19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 NANOGQ9H9S0 305 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 RIC8BQ9NVN3 520 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 TMEM9Q9P0T7 183 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 PCTPQ9UKL6 214 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 IKZF3Q9UKT9 509 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 FAM234BA2RU67 622 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 MYADML2A6NDP7 307 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 TRIM64BA6NI03 449 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 PIRTP0C851 137 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR1E1P30953 314 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 FMO4P31512 558 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 ACVRL1P37023 503 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 CD97P48960 835 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 MAPKAPK2P49137 400 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 GPR107Q5VW38 600 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 AFTPHQ6ULP2 937 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 KCTD8Q6ZWB6 473 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 BIRC7Q96CA5 298 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 THAP11Q96EK4 314 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 LRRC3Q9BY71 257 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 TBC1D23Q9NUY8 699 aa19.95■□□□□ 0.78
SYNGAP1-227ENST00000638142 CDC7O00311 574 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 ATP6V1G1O75348 118 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 SNAP29O95721 258 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 RPLP2P05387 115 aaKnown RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF140P52738 457 aaPredicted RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 DSC3Q14574 896 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 DDR2Q16832 855 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 ALG1LQ6GMV1 187 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 PRR23BQ6ZRT6 265 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 BORCS5Q969J3 196 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 TMEM74Q96NL1 305 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF225Q9UK10 706 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 PRSS56P0CW18 603 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 HRH2P25021 359 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 PRDX3P30048 256 aaKnown RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF829Q3KNS6 432 aaPredicted RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 TIGD2Q4W5G0 525 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 CIR1Q86X95 450 aaPredicted RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR56A4Q8NGH8 313 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 BPIFB1Q8TDL5 484 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 GIPC3Q8TF64 312 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 TRIB3Q96RU7 358 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 HGH1Q9BTY7 390 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 CHID1Q9BWS9 393 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms