RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MLF2Q15773 248 aaPredicted RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 CRY1Q16526 586 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 TTC31Q49AM3 519 aaPredicted RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 SLC44A4Q53GD3 710 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 C2orf27AQ580R0 203 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 LRRC8EQ6NSJ5 796 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 MACC1Q6ZN28 852 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 Q6ZVL8 140 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 ADHFE1Q8IWW8 467 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 PLD6Q8N2A8 252 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 AADATQ8N5Z0 425 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 TXNDC5Q8NBS9 432 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 NUS1Q96E22 293 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 MRPL57Q9BQC6 102 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 MRPL46Q9H2W6 279 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 C12orf65Q9H3J6 166 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 CD248Q9HCU0 757 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 IGSF5Q9NSI5 407 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 TMEM216Q9P0N5 145 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 KLHL42Q9P2K6 505 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 COPG2Q9UBF2 871 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 TRMT6Q9UJA5 497 aaKnown RBP15.21■□□□□ 0.03
CLN6-219ENST00000637329 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
CLN6-219ENST00000637329 PLXNB3Q9ULL4 1909 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 A0A1W2PQF6 199 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 ANTXRLA6NF34 631 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 SHISA7A6NL88 538 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 TCP11X1B4DZS4 312 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 OR1I1O60431 355 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 DNTTP04053 509 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 RBP1P09455 135 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 CCDC166P0CW27 439 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 RALBP11234 206 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 GM2AP17900 193 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 PRKAA2P54646 552 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 TIAL1Q01085 375 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLN6-219ENST00000637329 PCLAFQ15004 111 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 ACAP2Q15057 778 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 AGERQ15109 404 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 LDLRAP1Q5SW96 308 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 PTRHD1Q6GMV3 140 aaKnown RBP15.2■□□□□ 0.02
CLN6-219ENST00000637329 PIM3Q86V86 326 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 NKAPQ8N5F7 415 aaKnown RBP15.2■□□□□ 0.02
CLN6-219ENST00000637329 PNPLA1Q8N8W4 532 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
CLN6-219ENST00000637329 GPR78Q96P69 363 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 WRAP53Q9BUR4 548 aaKnown RBP15.2■□□□□ 0.02
CLN6-219ENST00000637329 DERL2Q9GZP9 239 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 ABCG8Q9H221 673 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 FZD4Q9ULV1 537 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
CLN6-219ENST00000637329 GFRA3O60609 400 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 AP2A2O94973 939 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 VIMP08670 466 aaKnown RBP15.19■□□□□ 0.02
CLN6-219ENST00000637329 CPA3P15088 417 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 UGT1A6P19224 532 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 DRD4P21917 467 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 UGT1A1P22309 533 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 UGT1A4P22310 534 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 UGT1A3P35503 534 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 UGT1A5P35504 534 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 ASPHQ12797 758 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 DLG1Q12959 904 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 LRRC32Q14392 662 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 TECRLQ5HYJ1 363 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 GPRC6AQ5T6X5 926 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 KIAA1211LQ6NV74 962 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 ZYG11AQ6WRX3 759 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 ZNF852Q6ZMS4 543 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 RFLNAQ6ZTI6 216 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 USP30Q70CQ3 517 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 KBTBD6Q86V97 674 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 NUDCD3Q8IVD9 361 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 SYNPOQ8N3V7 929 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 FSTL5Q8N475 847 aaPredicted RBP15.19■□□□□ 0.02
CLN6-219ENST00000637329 RPLP0P6Q8NHW5 317 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 CD200R1Q8TD46 325 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 BCAS4Q8TDM0 211 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 GRAMD1AQ96CP6 724 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 AP2M1Q96CW1 435 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 PANX3Q96QZ0 392 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 GPR21Q99679 349 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 RIOK2Q9BVS4 552 aaKnown RBP15.19■□□□□ 0.02
CLN6-219ENST00000637329 TSSK1BQ9BXA7 367 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 ZCCHC2Q9C0B9 1178 aaKnown RBP15.19■□□□□ 0.02
CLN6-219ENST00000637329 MANSC1Q9H8J5 431 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 XPR1Q9UBH6 696 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 CD84Q9UIB8 345 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 SORCS3Q9UPU3 1222 aa15.19■□□□□ 0.02
CLN6-219ENST00000637329 RUVBL2Q9Y230 463 aaKnown RBP15.19■□□□□ 0.02
CLN6-219ENST00000637329 CFAP54Q96N23 3096 aa15.18■□□□□ 0.02
CLN6-219ENST00000637329 TARM1B6A8C7 271 aa15.18■□□□□ 0.02
CLN6-219ENST00000637329 TK2O00142 265 aa15.18■□□□□ 0.02
CLN6-219ENST00000637329 EIF3FO00303 357 aaPredicted RBP15.18■□□□□ 0.02
CLN6-219ENST00000637329 NDUFAB1O14561 156 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms