RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 IP6K1Q92551 441 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 MRPS27Q92552 414 aaKnown RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 SGCDQ92629 289 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 LPAR1Q92633 364 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 SECISBP2LQ93073 1101 aaKnown RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 MOAP1Q96BY2 351 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 PABPC5Q96DU9 382 aaKnown RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 CDHR1Q96JP9 859 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 FRG2BQ96QU4 278 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 FNBP1Q96RU3 617 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 ZNF347Q96SE7 839 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 FIZ1Q96SL8 496 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 SIN3AQ96ST3 1273 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 PAFAH2Q99487 392 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 CITED2Q99967 270 aaPredicted RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 CCDC106Q9BWC9 280 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 MRPL9Q9BYD2 267 aaKnown RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 GLIS2Q9BZE0 524 aaPredicted RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 ANKRD2Q9GZV1 360 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 OSGEPL1Q9H4B0 414 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 OPA3Q9H6K4 179 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 DBNDD1Q9H9R9 158 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 TXNRD2Q9NNW7 524 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 ARHGEF38Q9NXL2 777 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 GRHL1Q9NZI5 618 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 ABI3Q9P2A4 366 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 KCNG2Q9UJ96 466 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 MYO6Q9UM54 1294 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 CARD8Q9Y2G2 431 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 PCDHGB1Q9Y5G3 927 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 UBR1Q8IWV7 1749 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.26□□□□□ -1.89
VPS8-228ENST00000628962 MST1RQ04912 1400 aa3.26□□□□□ -1.89
VPS8-228ENST00000628962 MYO5CQ9NQX4 1742 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 CDC42BPBQ9Y5S2 1711 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 CTTNBP2Q8WZ74 1663 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 ERVK-7P63135 1459 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PRXQ9BXM0 1461 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 RPS10-NUDT3A0A1W2PQS6 291 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 TARSL2A2RTX5 802 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 OR2A25A4D2G3 310 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 CXorf65A6NEN9 183 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 URADA6NGE7 173 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 LRRC72A6NJI9 287 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 A6NNC1 897 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 NPIPB11E5RHQ5 1161 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 IFNL4K9M1U5 179 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 HCRTR2O43614 444 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 SLC25A17O43808 307 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 AVILO75366 819 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PSMD10O75832 226 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 MTA2O94776 668 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PCNAP12004 261 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 FDPSP14324 419 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 IFNAR1P17181 557 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PTPN2P17706 415 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PON1P27169 355 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 YWHAQP27348 245 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 CHRNA5P30532 468 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 GP5P40197 560 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 ERVFC1-1P60608 527 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 SNTB1Q13884 538 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 BAATQ14032 418 aaPredicted RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 DRAP1Q14919 205 aaPredicted RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 SF3B4Q15427 424 aaKnown RBP eCLIP3.25□□□□□ -1.89
VPS8-228ENST00000628962 ADIPOQQ15848 244 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 IZUMO4Q1ZYL8 232 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 IGSF11Q5DX21 431 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 WASHC2DQ5SRD0 308 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PRSS57Q6UWY2 283 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 TBC1D26Q86UD7 250 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 WDR5BQ86VZ2 330 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 LURAP1LQ8IV03 231 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 DHX40Q8IX18 779 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 CCDC170Q8IYT3 715 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 NUP93Q8N1F7 819 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 TMCO5AQ8N6Q1 288 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 TMEM217Q8N7C4 229 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 FAM47BQ8NA70 645 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 DEPDC1BQ8WUY9 529 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 FAR1Q8WVX9 515 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 TMCO6Q96DC7 493 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 ZC3HAV1LQ96H79 300 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 DGAT2Q96PD7 388 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 SPAG5Q96R06 1193 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 WDR83Q9BRX9 315 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 C1QTNF1Q9BXJ1 281 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 BPIFA1Q9NP55 256 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 SETD4Q9NVD3 440 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PSD3Q9NYI0 1048 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 WDR35Q9P2L0 1181 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 CNOT8Q9UFF9 292 aaKnown RBP3.25□□□□□ -1.89
VPS8-228ENST00000628962 ANAPC2Q9UJX6 822 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 PADI1Q9ULC6 663 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 INSL5Q9Y5Q6 135 aa3.25□□□□□ -1.89
VPS8-228ENST00000628962 SPHKAPQ2M3C7 1700 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 UTYO14607 1347 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SPATA31A5Q5VU36 1347 aa3.24□□□□□ -1.89
VPS8-228ENST00000628962 SPATA31A7Q8IWB4 1347 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms