RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ZCCHC2Q9C0B9 1178 aaKnown RBP20.08■□□□□ 0.81
PTCD3-220ENST00000627371 MRM3Q9HC36 420 aaKnown RBP20.08■□□□□ 0.81
PTCD3-220ENST00000627371 CHRAC1Q9NRG0 131 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 FTSJ1Q9UET6 329 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 SLC2A6Q9UGQ3 507 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 CRLS1Q9UJA2 301 aa20.08■□□□□ 0.81
PTCD3-220ENST00000627371 PCYT1BQ9Y5K3 369 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-220ENST00000627371 FAM187AA6NFU0 413 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 GIPC1O14908 333 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 CHUKO15111 745 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 YY2O15391 372 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 SIGLEC6O43699 453 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 AVILO75366 819 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 MAGEA3P43357 314 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 TMEM115Q12893 351 aaPredicted RBP20.07■□□□□ 0.8
PTCD3-220ENST00000627371 ILF3Q12906 894 aaKnown RBP eCLIP20.07■□□□□ 0.8
PTCD3-220ENST00000627371 LRP8Q14114 963 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 TRIP6Q15654 476 aaKnown RBP20.07■□□□□ 0.8
PTCD3-220ENST00000627371 GPR33Q49SQ1 333 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 GLRX5Q86SX6 157 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 CCL4L1Q8NHW4 92 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 CNDP2Q96KP4 475 aaKnown RBP20.07■□□□□ 0.8
PTCD3-220ENST00000627371 KIFC1Q9BW19 673 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 GSDMCQ9BYG8 508 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 SOX13Q9UN79 622 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 DOLKQ9UPQ8 538 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 GPSM3Q9Y4H4 160 aa20.07■□□□□ 0.8
PTCD3-220ENST00000627371 TRBV5-4A0A0C4DH59 114 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 CCDC162PA2VCL2 907 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 GRID2O43424 1007 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 RAD51CO43502 376 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 CDK14O94921 469 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 LDOC1O95751 146 aaPredicted RBP20.06■□□□□ 0.8
PTCD3-220ENST00000627371 CACNG1Q06432 222 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 MORF4L2Q15014 288 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 PROX2Q3B8N5 592 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 ZRANB3Q5FWF4 1079 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 C6orf132Q5T0Z8 1188 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 ZCCHC8Q6NZY4 707 aaKnown RBP20.06■□□□□ 0.8
PTCD3-220ENST00000627371 TAF8Q7Z7C8 310 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 NXPE1Q8N323 547 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 FAM181AQ8N9Y4 354 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 SCG3Q8WXD2 468 aaKnown RBP20.06■□□□□ 0.8
PTCD3-220ENST00000627371 HDAC10Q969S8 669 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 SNF8Q96H20 258 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 TREX1Q9NSU2 369 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 ZNHIT2Q9UHR6 403 aa20.06■□□□□ 0.8
PTCD3-220ENST00000627371 SPEGQ15772 3267 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 EFCAB8A8MWE9 144 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 SMAPO00193 183 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 TNFSF14O43557 240 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 SEC31AO94979 1220 aaKnown RBP20.05■□□□□ 0.8
PTCD3-220ENST00000627371 FOXN2P32314 431 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 PRAMEP78395 509 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 MRPS25P82663 173 aaKnown RBP20.05■□□□□ 0.8
PTCD3-220ENST00000627371 CTBSQ01459 385 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 GTF2H3Q13889 308 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 AFTPHQ6ULP2 937 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 MICALCLQ6ZW33 695 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 DGLUCYQ7Z3D6 616 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 LRRTM4Q86VH4 590 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 NRROSQ86YC3 692 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 MPP5Q8N3R9 675 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 SGSM3Q96HU1 749 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 APOLD1Q96LR9 279 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 TTC25Q96NG3 672 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 BOCQ9BWV1 1114 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 TRIM31Q9BZY9 425 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 FAM96AQ9H5X1 160 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 PRKAB1Q9Y478 270 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 PLEKHM1Q9Y4G2 1056 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 ST14Q9Y5Y6 855 aa20.05■□□□□ 0.8
PTCD3-220ENST00000627371 OR51F1A6NGY5 319 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 SDR42E2A6NKP2 422 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 GOT2P00505 430 aaKnown RBP20.04■□□□□ 0.8
PTCD3-220ENST00000627371 MSH3P20585 1137 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 ACRV1P26436 265 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 AK4P27144 223 aaPredicted RBP20.04■□□□□ 0.8
PTCD3-220ENST00000627371 NMBRP28336 390 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 AKT1P31749 480 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 CDKN1CP49918 316 aaPredicted RBP20.04■□□□□ 0.8
PTCD3-220ENST00000627371 ITGA8P53708 1063 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 HIBCHQ6NVY1 386 aaPredicted RBP20.04■□□□□ 0.8
PTCD3-220ENST00000627371 CASC4Q6P4E1 433 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 CRTC3Q6UUV7 619 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 CHST15Q7LFX5 561 aaPredicted RBP20.04■□□□□ 0.8
PTCD3-220ENST00000627371 RASGEF1AQ8N9B8 481 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 HEXDCQ8WVB3 486 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 ERP44Q9BS26 406 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 SAMD15Q9P1V8 674 aa20.04■□□□□ 0.8
PTCD3-220ENST00000627371 SPAARA0A1B0GVQ0 90 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 MAGEB16A2A368 324 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 NDC80O14777 642 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 KMOO15229 486 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 PRSS56P0CW18 603 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 ACP5P13686 325 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 KCNA4P22459 653 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 ACTR1BP42025 376 aa20.03■□□□□ 0.8
PTCD3-220ENST00000627371 RPL21P46778 160 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms