RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MAGEB16A2A368 324 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 CCDC162PA2VCL2 907 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 TP73O15350 636 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 GPR39O43194 453 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A9O60656 530 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 BANF1O75531 89 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 RHOXF2BP0C7M4 288 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 GIMD1P0DJR0 217 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 PAMP19021 973 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A6P19224 532 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A1P22309 533 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A4P22310 534 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 PSMA3P25788 255 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 NMBRP28336 390 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A3P35503 534 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A5P35504 534 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 XIAPP98170 497 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 ACVR1Q04771 509 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 NFATC2Q13469 925 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 PEX6Q13608 980 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 MSS51Q4VC12 460 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 ZRANB3Q5FWF4 1079 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 CES3Q6UWW8 571 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 CENPUQ71F23 418 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 SNX20Q7Z614 316 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 OR56A4Q8NGH8 313 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 SEC14L1Q92503 715 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 ART4Q93070 314 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 HDAC10Q969S8 669 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 ULK4Q96C45 1275 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 LRRC39Q96DD0 335 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 COX14Q96I36 57 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 SIGLEC10Q96LC7 697 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 PWWP2AQ96N64 755 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 RHOXF2Q9BQY4 288 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 NAT9Q9BTE0 207 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 SUDS3Q9H7L9 328 aaPredicted RBP14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A7Q9HAW7 530 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A10Q9HAW8 530 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UGT1A8Q9HAW9 530 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 FGF22Q9HCT0 170 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 ARFGAP3Q9NP61 516 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 SMOXQ9NWM0 555 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 UCKL1Q9NWZ5 548 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 FTSJ1Q9UET6 329 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
PNKP-221ENST00000627317 APOBEC2Q9Y235 224 aaKnown RBP14.57□□□□□ -0.08
PNKP-221ENST00000627317 MSRB2Q9Y3D2 182 aa14.57□□□□□ -0.08
PNKP-221ENST00000627317 TMEM202A6NGA9 273 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 OR51F1A6NGY5 319 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 C1QTNF9BB2RNN3 333 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 H3BM21 787 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 TRIM38O00635 465 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 SDC3O75056 442 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 RASGRP1O95267 797 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 GOT2P00505 430 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 C1QTNF9P0C862 333 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 NME1P15531 152 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 PGAM1P18669 254 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 DGKAP23743 735 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 AKT1P31749 480 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PPARDQ03181 441 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 CACNG1Q06432 222 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PDIA2Q13087 525 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 EIF2B5Q13144 721 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 HLTFQ14527 1009 aaKnown RBP eCLIP14.56□□□□□ -0.08
PNKP-221ENST00000627317 TRADDQ15628 312 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 ALG11Q2TAA5 492 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PROX2Q3B8N5 592 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 GPR33Q49SQ1 333 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 ANKRD20A4Q4UJ75 823 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 ZNF542PQ5EBM4 170 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 LDLRAP1Q5SW96 308 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 GPRC6AQ5T6X5 926 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 TAS2R42Q7RTR8 314 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 HID1Q8IV36 788 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PHACTR4Q8IZ21 702 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 AGGF1Q8N302 714 aaeCLIP14.56□□□□□ -0.08
PNKP-221ENST00000627317 OTUD6BQ8N6M0 293 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 FBXO25Q8TCJ0 367 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 OR1E3Q8WZA6 343 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 MFSD3Q96ES6 412 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PDXPQ96GD0 296 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 EBNA1BP2Q99848 306 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 FAM129AQ9BZQ8 928 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 SLC13A1Q9BZW2 595 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 ZCCHC2Q9C0B9 1178 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 FAM96AQ9H5X1 160 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 TREX1Q9NSU2 369 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 KLF15Q9UIH9 416 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PNMA8BQ9ULN7 279 aaPredicted RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 CHMP2BQ9UQN3 213 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 TMEM98Q9Y2Y6 226 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 OAS3Q9Y6K5 1087 aaKnown RBP14.56□□□□□ -0.08
PNKP-221ENST00000627317 RPS6KL1Q9Y6S9 549 aa14.56□□□□□ -0.08
PNKP-221ENST00000627317 PRSS38A1L453 326 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 TNFRSF10CO14798 259 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 PIAS2O75928 621 aa14.55□□□□□ -0.08
PNKP-221ENST00000627317 SLU7O95391 586 aaKnown RBP14.55□□□□□ -0.08
PNKP-221ENST00000627317 TTC4O95801 387 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms