RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 C3orf30Q96M34 536 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 KLHL5Q96PQ7 755 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 PSKH2Q96QS6 385 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 NUSAP1Q9BXS6 441 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 MAGEH1Q9H213 219 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 MUC13Q9H3R2 512 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 TUBB1Q9H4B7 451 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 HSFX1Q9UBD0 423 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 HCSTQ9UBK5 93 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 UXTQ9UBK9 157 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 SEPT3Q9UH03 358 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 NCOR1O75376 2440 aa7.13□□□□□ -1.27
CTNNA1-244ENST00000627109 LCHNA4D1U4 455 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 H3BMM5 538 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CD3EAPO15446 510 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 NRP2O60462 931 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 GOT2P00505 430 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PRLP01236 227 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PIRTP0C851 137 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 ATP6V0D1P61421 351 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CDKL1Q00532 357 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 FASTKQ14296 549 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 NRF1Q16656 503 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PABPC1LQ4VXU2 614 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 GPR158Q5T848 1215 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 C16orf59Q7L2K0 433 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 IFNEQ86WN2 208 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 FIBCD1Q8N539 461 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 MFSD2AQ8NA29 543 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 BLOC1S5Q8TDH9 187 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 HOPXQ9BPY8 73 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 AASDHPPTQ9NRN7 309 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TMEM161AQ9NX61 479 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 AURKCQ9UQB9 309 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 MICAL3Q7RTP6 2002 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 MTMR11A4FU01 709 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 AQP12BA6NM10 295 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 VILLO15195 856 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 KDELR3O43731 214 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 ALDH2P05091 517 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 YWHAQP27348 245 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CLCN4P51793 760 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 WDR5P61964 334 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 GPNMBQ14956 572 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 SAMD4BQ5PRF9 694 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 INTS11Q5TA45 600 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 C1orf53Q5VUE5 145 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CHST9Q7L1S5 443 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 AQP12AQ8IXF9 295 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 METTL25Q8N6Q8 603 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 NAT14Q8WUY8 206 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 ISG20Q96AZ6 181 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PDLIM5Q96HC4 596 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TMEM169Q96HH4 297 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 BIRC8Q96P09 236 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 SPON2Q9BUD6 331 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 C8orf4Q9NR00 106 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TLR8Q9NR97 1041 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 ZNF639Q9UID6 485 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 COLQQ9Y215 455 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 MTF2Q9Y483 593 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 PCDHA9Q9Y5H5 950 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 GPR45Q9Y5Y3 372 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TTC28Q96AY4 2481 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CCDC162PA2VCL2 907 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 DLGAP1O14490 977 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 RAMP2O60895 175 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 NDST3O95803 873 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CA3P07451 260 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 FOSL1P15407 271 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 NELFEP18615 380 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 GSTT1P30711 240 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CDH13P55290 713 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 POLD3Q15054 466 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TAF1AQ15573 450 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 KRT80Q6KB66 452 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CASD1Q96PB1 797 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CCT7Q99832 543 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 SH3GL3Q99963 347 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 ANKRD60Q9BZ19 345 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 MUC3BQ9H195 1237 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CCDC68Q9H2F9 335 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CRISPLD1Q9H336 500 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 CCM2LQ9NUG4 571 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 SNX13Q9Y5W8 968 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 AP4B1Q9Y6B7 739 aa7.12□□□□□ -1.27
CTNNA1-244ENST00000627109 TRIM64BA6NI03 449 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 C9JVG2 144 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TNFAIP8O95379 198 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 GLP2RO95838 553 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 NPPAP01160 153 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 GFAPP14136 432 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 TACR2P21452 398 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 CTNNB1P35222 781 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 RPL5P46777 297 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 EFEMP1Q12805 493 aa7.11□□□□□ -1.27
CTNNA1-244ENST00000627109 DDR2Q16832 855 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms