RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 GRPEL2Q8TAA5 225 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CHAC2Q8WUX2 184 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 USP13Q92995 863 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 RNF34Q969K3 372 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 INTS12Q96CB8 462 aaKnown RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 OMDQ99983 421 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MAT2BQ9NZL9 334 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 TNFRSF10DQ9UBN6 386 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MID2Q9UJV3 735 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 ANKRD6Q9Y2G4 727 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 PRSS51A0A1B0GVH4 220 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 H0YJX3 145 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 DLX3O60479 287 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 KCNK2O95069 426 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 MT-CYBP00156 380 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 XRCC1P18887 633 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 MATN1P21941 496 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CSRP3P50461 194 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 RAD23AP54725 363 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 LDLRAD1Q5T700 205 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 NAPEPLDQ6IQ20 393 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 C16orf89Q6UX73 402 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CENPLQ8N0S6 344 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 AFAP1L2Q8N4X5 818 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CCNYL1Q8N7R7 359 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 GTF3C2Q8WUA4 911 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 ZFPM2Q8WW38 1151 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 PIK3R3Q92569 461 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 NXNL1Q96CM4 212 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 KIFC1Q9BW19 673 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 SIK2Q9H0K1 926 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
LITAF-221ENST00000622633 CAB39Q9Y376 341 aaPredicted RBP12.38□□□□□ -0.43
LITAF-221ENST00000622633 TMEM233B4DJY2 109 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 STX16-NPEPL1H3BU86 382 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CCNKO75909 580 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 VAPBO95292 243 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 UGT2B4P06133 528 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ENO3P13929 434 aaPredicted RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 CXCR3P49682 368 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ETV1P50549 477 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 RAD51Q06609 339 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PRKAA1Q13131 559 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 SLC12A1Q13621 1099 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 HERC3Q15034 1050 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CCNJQ5T5M9 372 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 KIAA0408Q6ZU52 694 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 BHLHA9Q7RTU4 235 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CEP97Q8IW35 865 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CHCHD4Q8N4Q1 142 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 FAM47BQ8NA70 645 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 GALNT11Q8NCW6 608 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 IPMKQ8NFU5 416 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 RP9Q8TA86 221 aaKnown RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 RDH11Q8TC12 318 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 STYXQ8WUJ0 223 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CEP19Q96LK0 163 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 SECISBP2Q96T21 854 aaKnown RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 VAT1Q99536 393 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 SLA2Q9H6Q3 261 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 COQ10BQ9H8M1 238 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 POLR1BQ9H9Y6 1135 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PLSCR3Q9NRY6 295 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 COQ3Q9NZJ6 369 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 ACTR3BQ9P1U1 418 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 XPR1Q9UBH6 696 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PRPF19Q9UMS4 504 aaKnown RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 CDYLQ9Y232 598 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 HHLA1C9JL84 531 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PDPK1O15530 556 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 MAN1A2O60476 641 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PGK1P00558 417 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 MRPS15P82914 257 aaKnown RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 MS4A2Q01362 244 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 VAC14Q08AM6 782 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 IKBKEQ14164 716 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 FLOT2Q14254 428 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 GRB14Q14449 540 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 MAPRE2Q15555 327 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 EML3Q32P44 896 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 RAB41Q5JT25 222 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 LRRC8EQ6NSJ5 796 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 KDELC2Q7Z4H8 507 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 TAC4Q86UU9 113 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CLYBLQ8N0X4 340 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 SNX19Q92543 992 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PMM1Q92871 262 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 PGAP3Q96FM1 320 aaPredicted RBP12.37□□□□□ -0.43
LITAF-221ENST00000622633 SERPINI1Q99574 410 aa12.37□□□□□ -0.43
LITAF-221ENST00000622633 CHID1Q9BWS9 393 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms