RNA–Protein interactions for RNA: ENST00000622405.4

PSMA6-215, Transcript of proteasome subunit alpha 6, human

TSL 2 BASIC

Gene PSMA6, Length 978 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA6-215	ENST00000622405	ZNF8	P17098	575 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	CXCR5	P32302	372 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	TMEM115	Q12893	351 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	LAMB3	Q13751	1172 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	SPIDR	Q14159	915 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	CHRNA6	Q15825	494 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	ATP13A5	Q4VNC0	1218 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	FAM151B	Q6UXP7	276 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	RBM44	Q6ZP01	1051 aa	Known RBP	13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	LSMEM2	Q8N112	164 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	OR4K2	Q8NGD2	314 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	ZNF398	Q8TD17	642 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	NAP1L3	Q99457	506 aa	Predicted RBP	13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	SYNDIG1	Q9H7V2	258 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	ARFGAP3	Q9NP61	516 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	PRKAB1	Q9Y478	270 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	PLEKHM1	Q9Y4G2	1056 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	AK5	Q9Y6K8	562 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	SCN8A	Q9UQD0	1980 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	ZFHX4	Q86UP3	3567 aa		13.37	□□□□□ -0.27
PSMA6-215	ENST00000622405	TMX2-CTNND1	H3BSU7	103 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	CHUK	O15111	745 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A9	O60656	530 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	ECEL1	O95672	775 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	ACP5	P13686	325 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	VCL	P18206	1134 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A6	P19224	532 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A1	P22309	533 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A4	P22310	534 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A3	P35503	534 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A5	P35504	534 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	OLIG2	Q13516	323 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	DENND5A	Q6IQ26	1287 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	LRRTM4	Q86VH4	590 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	C17orf82	Q86X59	251 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	CCNJL	Q8IV13	435 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	REXO1L1P	Q8IX06	675 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	ARL14	Q8N4G2	192 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	TAB3	Q8N5C8	712 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405		Q8N9G6	341 aa	Predicted RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	DNAAF3	Q8N9W5	541 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	GFM1	Q96RP9	751 aa	Known RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	LRRN3	Q9H3W5	708 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	STN1	Q9H668	368 aa	Known RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A7	Q9HAW7	530 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A10	Q9HAW8	530 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	UGT1A8	Q9HAW9	530 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	ETNK1	Q9HBU6	452 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	TRMT1	Q9NXH9	659 aa	Known RBP	13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	RNF215	Q9Y6U7	377 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	CELSR3	Q9NYQ7	3312 aa		13.36	□□□□□ -0.27
PSMA6-215	ENST00000622405	DSP	P15924	2871 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	OR5K4	A6NMS3	321 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	NTN3	O00634	580 aa	Predicted RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	KCNJ13	O60928	360 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	CS	O75390	466 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	MTX2	O75431	263 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SRP72	O76094	671 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	PRAMEF1	O95521	474 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	RPLP0	P05388	317 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	MSH3	P20585	1137 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	GPR3	P46089	330 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	CLCNKA	P51800	687 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	MAZ	P56270	477 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	CCL7	P80098	99 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	CDH17	Q12864	832 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	MSLN	Q13421	630 aa	Predicted RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SIX1	Q15475	284 aa	Predicted RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	INSC	Q1MX18	579 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	KIF26B	Q2KJY2	2108 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	ISX	Q2M1V0	245 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	ZNF648	Q5T619	568 aa	Predicted RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	IGF2-AS	Q6U949	168 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	PPP1R21	Q6ZMI0	780 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SLC9B2	Q86UD5	537 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	NAGS	Q8N159	534 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	AVL9	Q8NBF6	648 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	DDHD1	Q8NEL9	900 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SNIP1	Q8TAD8	396 aa	Known RBP	13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	ULK4	Q96C45	1275 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	PDLIM2	Q96JY6	352 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	KCNF1	Q9H3M0	494 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	ASB8	Q9H765	288 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	RAB6B	Q9NRW1	208 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	KLC4	Q9NSK0	619 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SMOX	Q9NWM0	555 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	KCNK6	Q9Y257	313 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	RAX	Q9Y2V3	346 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	ST14	Q9Y5Y6	855 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405	SLC30A1	Q9Y6M5	507 aa		13.35	□□□□□ -0.27
PSMA6-215	ENST00000622405		A0A087WV48	116 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	AP3B1	O00203	1094 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	SNX2	O60749	519 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	DXO	O77932	396 aa	Known RBP	13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	RALB	P11234	206 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	ZNF7	P17097	686 aa	Predicted RBP	13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	TPH1	P17752	444 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	ITGAL	P20701	1170 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	ALDH4A1	P30038	563 aa		13.34	□□□□□ -0.27
PSMA6-215	ENST00000622405	AKT1	P31749	480 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms