RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 LRRC19Q9H756 370 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 UCK1Q9HA47 277 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 WASH6PQ9NQA3 447 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 METTL5Q9NRN9 209 aaKnown RBP14.3□□□□□ -0.12
SNX12-206ENST00000622259 RMND1Q9NWS8 449 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 KCTD5Q9NXV2 234 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 MAP1AP78559 2803 aaPredicted RBP14.3□□□□□ -0.12
SNX12-206ENST00000622259 SEC16AO15027 2179 aa14.3□□□□□ -0.12
SNX12-206ENST00000622259 HTRA2O43464 458 aaPredicted RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 CPNE3O75131 537 aaKnown RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 SLC9A1P19634 815 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SSTR2P30874 369 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 CDH5P33151 784 aaPredicted RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 SLC19A1P41440 591 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 CAPZBP47756 277 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 PDE1BQ01064 536 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SMTNL2Q2TAL5 461 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 VWA2Q5GFL6 755 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 PLEKHS1Q5SXH7 462 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 IRGCQ6NXR0 463 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SPOCD1Q6ZMY3 1216 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 MRGPRGQ86SM5 289 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 ZADH2Q8N4Q0 377 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 LZTR1Q8N653 840 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SIDT2Q8NBJ9 832 aaKnown RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 RXFP2Q8WXD0 754 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 AP2M1Q96CW1 435 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 CCDC120Q96HB5 630 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 TRAPPC9Q96Q05 1148 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 GSDMAQ96QA5 445 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 SEMA5BQ9P283 1151 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 NOVA2Q9UNW9 492 aaKnown RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 PCDHGC4Q9Y5F7 938 aa14.29□□□□□ -0.12
SNX12-206ENST00000622259 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
SNX12-206ENST00000622259 OR5K4A6NMS3 321 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 PSMD11O00231 422 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 SCRG1O75711 98 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 PALMO75781 387 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 RAB40ALP0C0E4 278 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 CD99P14209 185 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 SLC2A4P14672 509 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 CD1EP15812 388 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 CAPN3P20807 821 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 MARSP56192 900 aaKnown RBP14.28□□□□□ -0.12
SNX12-206ENST00000622259 KCNK10P57789 538 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 PAK1Q13153 545 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 MYBPC3Q14896 1274 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
SNX12-206ENST00000622259 TRIM65Q6PJ69 517 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 FAM198BQ6UWH4 519 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 ARHGAP36Q6ZRI8 547 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 ZNF514Q96K75 400 aaPredicted RBP14.28□□□□□ -0.12
SNX12-206ENST00000622259 NLNQ9BYT8 704 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 FGF21Q9NSA1 209 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 CNOT6Q9ULM6 557 aaKnown RBP14.28□□□□□ -0.12
SNX12-206ENST00000622259 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 NEU2Q9Y3R4 380 aa14.28□□□□□ -0.12
SNX12-206ENST00000622259 KCNN4O15554 427 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 CPP00450 1065 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 CD44P16070 742 aaKnown RBP14.27□□□□□ -0.13
SNX12-206ENST00000622259 XRCC1P18887 633 aaPredicted RBP14.27□□□□□ -0.13
SNX12-206ENST00000622259 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
SNX12-206ENST00000622259 HIF1AQ16665 826 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 ARCQ7LC44 396 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 GALNT16Q8N428 558 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 JOSD2Q8TAC2 188 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 ZDHHC12Q96GR4 267 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 SLX1AQ9BQ83 275 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 CINPQ9BW66 212 aaPredicted RBP14.27□□□□□ -0.13
SNX12-206ENST00000622259 SLC39A8Q9C0K1 460 aa14.27□□□□□ -0.13
SNX12-206ENST00000622259 GSX1Q9H4S2 264 aaPredicted RBP14.27□□□□□ -0.13
SNX12-206ENST00000622259 CCDC88CQ9P219 2028 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 MEN1O00255 615 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 FOXN3O00409 490 aaPredicted RBP14.26□□□□□ -0.13
SNX12-206ENST00000622259 CREB3O43889 395 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 FAM155BO75949 473 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 VIPP01282 170 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 ALPPP05187 535 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 DRD2P14416 443 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 CTPS1P17812 591 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 TPM4P67936 248 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 ACY1Q03154 408 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 NSUN2Q08J23 767 aaKnown RBP eCLIP14.26□□□□□ -0.13
SNX12-206ENST00000622259 GPR19Q15760 415 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 TTI2Q6NXR4 508 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 CYB5D1Q6P9G0 228 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 GAS2L3Q86XJ1 694 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 TMEM126BQ8IUX1 230 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 DSELQ8IZU8 1212 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 ZNF808Q8N4W9 903 aaPredicted RBP14.26□□□□□ -0.13
SNX12-206ENST00000622259 MLKLQ8NB16 471 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 CENPIQ92674 756 aaPredicted RBP14.26□□□□□ -0.13
SNX12-206ENST00000622259 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
SNX12-206ENST00000622259 MAP3K3Q99759 626 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms