RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 C1orf210Q8IVY1 113 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 RBFAQ8N0V3 343 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PELI3Q8N2H9 469 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GOLGA6L1Q8N7Z2 621 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 FRMD1Q8N878 549 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TP53I13Q8NBR0 393 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PLA2G15Q8NCC3 412 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CADM4Q8NFZ8 388 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 MZB1Q8WU39 189 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 VPS39Q96JC1 886 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 BIRC8Q96P09 236 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 KLF6Q99612 283 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 COPS8Q99627 209 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GPR22Q99680 433 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 GPR174Q9BXC1 333 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TPSD1Q9BZJ3 242 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 STMN4Q9H169 189 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PCED1AQ9H1Q7 454 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 P2RY12Q9H244 342 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CENPHQ9H3R5 247 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 C6orf106Q9H6K1 298 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 TRIM39Q9HCM9 518 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 PRMT8Q9NR22 394 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 MBNL1Q9NR56 388 aaKnown RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CTNNAL1Q9UBT7 734 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CORO1CQ9ULV4 474 aaPredicted RBP7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CRYL1Q9Y2S2 319 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 HS3ST3A1Q9Y663 406 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 CKAP5Q14008 2032 aa7.95□□□□□ -1.14
CPNE3-209ENST00000620393 FAM95CA0A1B0GW59 222 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 A0A1W2PPM1 405 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 METTL12A8MUP2 240 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 CFAP99D6REC4 459 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 INPP4BO15327 924 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 NDUFS2O75306 463 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 RFPL1O75677 317 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 FSBPO95073 299 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ESR1P03372 595 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 IGHV4-34P06331 123 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 HOXC4P09017 264 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TDGF1P13385 188 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ATP1B2P14415 290 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 PKMP14618 531 aaKnown RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 KRT15P19012 456 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 MSH3P20585 1137 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 CD9P21926 228 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ATP5DP30049 168 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ABCG1P45844 678 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 B4GALNT1Q00973 533 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 POU4F1Q01851 419 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DMWDQ09019 674 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TMEM115Q12893 351 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 BMPR2Q13873 1038 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 USP10Q14694 798 aaKnown RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TMED2Q15363 201 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 HECTD2Q5U5R9 776 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 RAET1GQ6H3X3 334 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 SLC36A4Q6YBV0 504 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 MACC1Q6ZN28 852 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 SH2D5Q6ZV89 423 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TRABD2AQ86V40 505 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 EXOC3L1Q86VI1 746 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 MAML2Q8IZL2 1156 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 FBXL6Q8N531 539 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DCLK2Q8N568 766 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TMEM105Q8N8V8 129 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DENND6BQ8NEG7 585 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DDHD1Q8NEL9 900 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ACVR1CQ8NER5 493 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 GDAP1Q8TB36 358 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ISL2Q96A47 359 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TLCD1Q96CP7 247 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DCUN1D1Q96GG9 259 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 COX14Q96I36 57 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 HIC2Q96JB3 615 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 ATP6V1G3Q96LB4 118 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 BMFQ96LC9 184 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 AARSD1Q9BTE6 412 aaKnown RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 BOCQ9BWV1 1114 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 TEX101Q9BY14 249 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 FAM126AQ9BYI3 521 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 CLPBQ9H078 707 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 EPHX3Q9H6B9 360 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 EBF2Q9HAK2 575 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 MED4Q9NPJ6 270 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 MBD1Q9UIS9 605 aaPredicted RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 SLC39A10Q9ULF5 831 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 NOVA2Q9UNW9 492 aaKnown RBP7.94□□□□□ -1.14
CPNE3-209ENST00000620393 DMTF1Q9Y222 760 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 INVSQ9Y283 1065 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 PCDHB1Q9Y5F3 818 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 COMMD10Q9Y6G5 202 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 PRSS21Q9Y6M0 314 aa7.94□□□□□ -1.14
CPNE3-209ENST00000620393 A0A1W2PPC4 97 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 UBA6A0AVT1 1052 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 FOXO6A8MYZ6 492 aa7.93□□□□□ -1.14
CPNE3-209ENST00000620393 HMGB1P1B2RPK0 211 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-209ENST00000620393 PRAMEF26H0Y7S4 382 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms