RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 SNF8Q96H20 258 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 COQ10AQ96MF6 247 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF317Q96PQ6 595 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 AGAP2Q99490 1192 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 VAT1Q99536 393 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 FICDQ9BVA6 458 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 GTPBP2Q9BX10 602 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 FRMD8Q9BZ67 464 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 CENPHQ9H3R5 247 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ETNK1Q9HBU6 452 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SSU72Q9NP77 194 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 BATF3Q9NR55 127 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 AASDHPPTQ9NRN7 309 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PIH1D1Q9NWS0 290 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 GEMIN8Q9NWZ8 242 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PNMA8BQ9ULN7 279 aaPredicted RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 PHTF1Q9UMS5 762 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF148Q9UQR1 794 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 MSRB2Q9Y3D2 182 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 KCTD3Q9Y597 815 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 TDRD6O60522 2096 aaKnown RBP5.23□□□□□ -1.57
SHMT1-211ENST00000618902 SPTA1P02549 2419 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 MYLKQ15746 1914 aa5.23□□□□□ -1.57
SHMT1-211ENST00000618902 DCDC2BA2VCK2 349 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 KLHL33A6NCF5 533 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 CAPN8A6NHC0 703 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 GPR89AB7ZAQ6 455 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TMX2-CTNND1H3BSU7 103 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SCAMP1O15126 338 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TP73O15350 636 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RIPK2O43353 540 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 BUD23O43709 281 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 MGRN1O60291 552 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 LZTS3O60299 673 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 NEBLO76041 1014 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RECQL5O94762 991 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 CLDN7O95471 211 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 AP2A1O95782 977 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SOD1P00441 154 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 EPOP01588 193 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 CSF2P04141 144 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 GPR89BP0CG08 455 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TPH1P17752 444 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 DRD4P21917 467 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 IVDP26440 423 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 STIP1P31948 543 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 HPDP32754 393 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TRIM23P36406 574 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ETV3P41162 512 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 MLLT3P42568 568 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 VPS41P49754 854 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 IL9RQ01113 521 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 DPTQ07507 201 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 MPP3Q13368 585 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 MTM1Q13496 603 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SEMA5AQ13591 1074 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 LRRC14Q15048 493 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 IRF4Q15306 451 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SHBQ15464 509 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SLC1A5Q15758 541 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SNCBQ16143 134 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 PARP6Q2NL67 630 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 P3H1Q32P28 736 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 WLSQ5T9L3 541 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 PDPK2PQ6A1A2 396 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ITPRIPL1Q6GPH6 555 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 C4orf22Q6V702 233 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RGS9BPQ6ZS82 235 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 USP45Q70EL2 814 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF534Q76KX8 674 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF765Q7L2R6 523 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 TRPM8Q7Z2W7 1104 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 LYSMD3Q7Z3D4 306 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RAB44Q7Z6P3 723 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 PARGQ86W56 976 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 NRSN1Q8IZ57 195 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 AGGF1Q8N302 714 aaeCLIP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 FSTL5Q8N475 847 aaPredicted RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 PDCD7Q8N8D1 485 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 AVL9Q8NBF6 648 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 OR13H1Q8NG92 308 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 OR4C6Q8NH72 309 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 FBXO25Q8TCJ0 367 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ZNF398Q8TD17 642 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RHBDD1Q8TEB9 315 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SAP25Q8TEE9 199 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 PTCD2Q8WV60 388 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 SCAMP4Q969E2 229 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ALKBH8Q96BT7 664 aaKnown RBP5.22□□□□□ -1.57
SHMT1-211ENST00000618902 DTD2Q96FN9 168 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 LYSMD1Q96S90 227 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ADGRE3Q9BY15 652 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 ABCG8Q9H221 673 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 IL21RQ9HBE5 538 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RAB6BQ9NRW1 208 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 RAD18Q9NS91 495 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 NKIRAS1Q9NYS0 192 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 NLGN3Q9NZ94 848 aa5.22□□□□□ -1.57
SHMT1-211ENST00000618902 KLHL14Q9P2G3 628 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms