RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 BTNL10A8MVZ5 291 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ZSCAN5DPP0CG00 497 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 EIPR1Q53HC9 387 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC24A5Q71RS6 500 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PTF1AQ7RTS3 328 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 GPR152Q8TDT2 470 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SNX33Q8WV41 574 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 KCNMB3Q9NPA1 279 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 ERVK-11Q9UQG0 969 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PCDHGA3Q9Y5H0 932 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SPATA31D3P0C874 917 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 CLCN7P51798 805 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 NR1H2P55055 460 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 SPATA31D4Q6ZUB0 917 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 DCAKDQ8WVC6 231 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 WRAP53Q9BUR4 548 aaKnown RBP11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 LRRC19Q9H756 370 aa11.1□□□□□ -0.63
CCDC144B-208ENST00000618081 C9P02748 559 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 GRM5P41594 1212 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PGBD2Q6P3X8 592 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC30A8Q8IWU4 369 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF527Q8NB42 609 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 KCTD4Q8WVF5 259 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CAPSLQ8WWF8 208 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RTKNQ9BST9 563 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CALML5Q9NZT1 146 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PCDHB11Q9Y5F2 797 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TMEM88BA6NKF7 163 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SELPP16109 830 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 GNALP38405 381 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 KIR3DL1P43629 444 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 NRG3P56975 720 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TMEM161BQ8NDZ6 487 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 OR6K2Q8NGY2 324 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM129BQ96TA1 746 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CDT1Q9H211 546 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 ZNF432O94892 652 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CDH3P22223 829 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 IL12AP29459 219 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 POLR2JP52435 117 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RTP1P59025 263 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 USP4Q13107 963 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC13A2Q13183 592 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PDK3Q15120 406 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TNFAIP8L3Q5GJ75 292 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CHST9Q7L1S5 443 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 DHDDSQ86SQ9 333 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SETD6Q8TBK2 473 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TCF12Q99081 682 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 IL12RB2Q99665 862 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 MOCS1Q9NZB8 636 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 AHCYL1O43865 530 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 HNRNPLP14866 589 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PPP3CAQ08209 521 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TUSC3Q13454 348 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 C5orf22Q49AR2 442 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CXorf57Q6NSI4 855 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 FEM1CQ96JP0 617 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 LGMNQ99538 433 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 MGME1Q9BQP7 344 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CNOT6Q9ULM6 557 aaKnown RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 A0A0J9YYE9 177 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 YDJCA8MPS7 323 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 CD247P20963 164 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 GNPDA1P46926 289 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 LDLRAP1Q5SW96 308 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC9A9Q8IVB4 645 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 OR2L3Q8NG85 312 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PIGXQ8TBF5 258 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 SLC22A17Q8WUG5 538 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 LHX5Q9H2C1 402 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TRIM39Q9HCM9 518 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RCOR3Q9P2K3 495 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 PRKCIP41743 596 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 TRPV5Q9NQA5 729 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RNF19AQ9NV58 838 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 RGS17Q9UGC6 210 aaPredicted RBP11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 FBXO5Q9UKT4 447 aa11.09□□□□□ -0.63
CCDC144B-208ENST00000618081 LCA5LO95447 670 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 PLGP00747 810 aaPredicted RBP11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 CCKBRP32239 447 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 RPIAP49247 311 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 CDH4P55283 916 aa11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 ILF3Q12906 894 aaKnown RBP eCLIP11.08□□□□□ -0.63
CCDC144B-208ENST00000618081 HEPACAMQ14CZ8 416 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms