RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 RAB44Q7Z6P3 723 aaPredicted RBP13.08□□□□□ -0.32
MSH6-214ENST00000616033 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 GATAD2AQ86YP4 633 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 CDYL2Q8N8U2 506 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 KIFC1Q9BW19 673 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 NSMCE4AQ9NXX6 385 aa13.08□□□□□ -0.32
MSH6-214ENST00000616033 G3V2T6 193 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CCR1P32246 355 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ACADSBP45954 432 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 AGTR2P50052 363 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ARSDP51689 593 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 COPZ1P61923 177 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ACAP2Q15057 778 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 COLEC12Q5KU26 742 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ZNF678Q5SXM1 525 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 PLD3Q8IV08 490 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 MICU2Q8IYU8 434 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ROPN1LQ96C74 230 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 NPY6RQ99463 290 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 UCKL1Q9NWZ5 548 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.07□□□□□ -0.329e-8■■■■□ 21.9
MSH6-214ENST00000616033 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 A0A087X1B8 175 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ASB14A6NK59 587 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TEX28O15482 410 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CLASP2O75122 1294 aaKnown RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 NDUFS2O75306 463 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 GJB3O75712 270 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 DIRAS1O95057 198 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 BMP4P12644 408 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 PRKACBP22694 351 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ICAM3P32942 547 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 HK2P52789 917 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TMBIM6P55061 237 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CD47Q08722 323 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 PHKG1Q16816 387 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CATSPEREQ5SY80 951 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 FKBP1CQ5VVH2 108 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ENPP6Q6UWR7 440 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 LINC00523Q86TU6 105 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TBC1D21Q8IYX1 336 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 MAGED4Q96JG8 741 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 B3GALT6Q96L58 329 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 NODALQ96S42 347 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TP63Q9H3D4 680 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 TUBB1Q9H4B7 451 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 CAB39Q9Y376 341 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 DEAF1O75398 565 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 C22orf31O95567 290 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 HLA-DQB2P05538 268 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 DBTP11182 482 aaKnown RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 CD86P42081 329 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 OXA1LQ15070 435 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ATP6AP1LQ52LC2 224 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 RSBN1Q5VWQ0 802 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 TXNDC11Q6PKC3 985 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 SPATC1Q76KD6 591 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 SLC38A6Q8IZM9 456 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TERB1Q8NA31 727 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TMEM125Q96AQ2 219 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 C12orf42Q96LP6 360 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 TBATAQ96M53 351 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 DMRTB1Q96MA1 342 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 VRTNQ9H8Y1 702 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 HPS4Q9NQG7 708 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
MSH6-214ENST00000616033 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 SLC30A1Q9Y6M5 507 aa13.07□□□□□ -0.32
MSH6-214ENST00000616033 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 C16orf96A6NNT2 1141 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 SNPHO15079 494 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 NPR3P17342 541 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ALOX12P18054 663 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 IMPDH1P20839 514 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 CRHBPP24387 322 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ARCN1P48444 511 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 WNT3AP56704 352 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 POU4F1Q01851 419 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 BNIP2Q12982 314 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 SELENBP1Q13228 472 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 CTU2Q2VPK5 515 aaKnown RBP13.06□□□□□ -0.32
MSH6-214ENST00000616033 SCML4Q8N228 414 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 PACRGLQ8N7B6 248 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 HASPINQ8TF76 798 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 OSCP1Q8WVF1 389 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 RORBQ92753 470 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ZUFSPQ96AP4 578 aa13.06□□□□□ -0.32
MSH6-214ENST00000616033 ZFP42Q96MM3 310 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms