RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
CBWD3-211ENST00000615061 E7EVH7 732 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 PPFIA2O75334 1257 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 ECEL1O95672 775 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 APRTP07741 180 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 CDK4P11802 303 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 LMAN1P49257 510 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 XIAPP98170 497 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 E2F1Q01094 437 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 TARDBPQ13148 414 aaKnown RBP eCLIP16.53■□□□□ 0.24
CBWD3-211ENST00000615061 PEX6Q13608 980 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 SEPT6Q14141 434 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC38Q502W7 563 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 CERCAMQ5T4B2 595 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 ZDHHC20Q5W0Z9 365 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 ZNF547Q8IVP9 402 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 NAGSQ8N159 534 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 DNAJC1Q96KC8 554 aaKnown RBP16.53■□□□□ 0.24
CBWD3-211ENST00000615061 ABCG4Q9H172 646 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 SLC23A2Q9UGH3 650 aa16.53■□□□□ 0.24
CBWD3-211ENST00000615061 FEZ2Q9UHY8 353 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-211ENST00000615061 TTC7AQ9ULT0 858 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-211ENST00000615061 PGRMC1O00264 195 aaKnown RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 CHUKO15111 745 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 PSMD3O43242 534 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 SRP72O76094 671 aaKnown RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 SUN1O94901 812 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 CDK14O94921 469 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 MSNP26038 577 aaKnown RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 TERF1P54274 439 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 GNG11P61952 73 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 TMEM115Q12893 351 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 CAMK2BQ13554 666 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 LRP8Q14114 963 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 HLTFQ14527 1009 aaKnown RBP eCLIP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 C14orf28Q4W4Y0 310 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 GPRC6AQ5T6X5 926 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 UNQ6494/PRO21346Q6UXR6 183 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 C17orf53Q8N3J3 647 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 DNAAF3Q8N9W5 541 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 ZNF398Q8TD17 642 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 DTX3LQ8TDB6 740 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 NAT6Q93015 286 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 CCDC97Q96F63 343 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-211ENST00000615061 RMI1Q9H9A7 625 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 RNF215Q9Y6U7 377 aa16.52■□□□□ 0.24
CBWD3-211ENST00000615061 TRBV23OR9-2A0A075B6M9 112 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 ERI2A8K979 691 aaKnown RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 FANCGO15287 622 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 MT-CO3P00414 261 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 VPS41P49754 854 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 CDH17Q12864 832 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 PPP1R21Q6ZMI0 780 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 FAM96AQ9H5X1 160 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 ASB8Q9H765 288 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 SYNDIG1Q9H7V2 258 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 HOMER3Q9NSC5 361 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 LRIT1Q9P2V4 623 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 CLCA2Q9UQC9 943 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 PRSS56P0CW18 603 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 CTSCP53634 463 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 PDE1BQ01064 536 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 NFATC2Q13469 925 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 CDCP2Q5VXM1 449 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 C17orf82Q86X59 251 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 ARL14Q8N4G2 192 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 DCBLD1Q8N8Z6 715 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 Q8N9G6 341 aaPredicted RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 DDHD1Q8NEL9 900 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 ACTRT1Q8TDG2 376 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 APPL1Q9UKG1 709 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 DNAJC16Q9Y2G8 782 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 PCDHB1Q9Y5F3 818 aa16.51■□□□□ 0.23
CBWD3-211ENST00000615061 URB1O60287 2271 aaKnown RBP16.51■□□□□ 0.23
CBWD3-211ENST00000615061 PKD1L2Q7Z442 2459 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 VEGFDO43915 354 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 SNX2O60749 519 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 GLB1P16278 677 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 MC4RP32245 332 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 CDKN1CP49918 316 aaPredicted RBP16.5■□□□□ 0.23
CBWD3-211ENST00000615061 C11orf96Q7Z7L8 435 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 LRRTM4Q86VH4 590 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 TRAPPC5Q8IUR0 188 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 RASGEF1AQ8N9B8 481 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 TTC25Q96NG3 672 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 CASS4Q9NQ75 786 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 SMOXQ9NWM0 555 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 CFAP47Q6ZTR5 3102 aa16.5■□□□□ 0.23
CBWD3-211ENST00000615061 A0A1W2PQM1 296 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 TCRBV7S3A2A0A539 114 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 TRABD2BA6NFA1 517 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 OR2AG2A6NM03 316 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 GPR89AB7ZAQ6 455 aa16.49■□□□□ 0.23
CBWD3-211ENST00000615061 GPR89BP0CG08 455 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms