RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 GPBAR1Q8TDU6 330 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 PEX13Q92968 403 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 HDAC10Q969S8 669 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 SERPINB12Q96P63 405 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 XAB2Q9HCS7 855 aaKnown RBP16.43■□□□□ 0.22
IRF1-211ENST00000613424 SYBUQ9NX95 663 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 DOLKQ9UPQ8 538 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 ST14Q9Y5Y6 855 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
IRF1-211ENST00000613424 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 FAM187AA6NFU0 413 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 GPR89AB7ZAQ6 455 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 CHUKO15111 745 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 GRID2O43424 1007 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 RAD51CO43502 376 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 GPR89BP0CG08 455 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 PRSS56P0CW18 603 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 ITGALP20701 1170 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 CTBSQ01459 385 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 ACVR1Q04771 509 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 TUBB2AQ13885 445 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 GPR33Q49SQ1 333 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 LVRNQ6Q4G3 990 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 GLRX5Q86SX6 157 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 HOOK3Q86VS8 718 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 SCG3Q8WXD2 468 aaKnown RBP16.42■□□□□ 0.22
IRF1-211ENST00000613424 ULK4Q96C45 1275 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 CNDP2Q96KP4 475 aaKnown RBP16.42■□□□□ 0.22
IRF1-211ENST00000613424 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 OR2M4Q96R27 311 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 TUBB2BQ9BVA1 445 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 KIFC1Q9BW19 673 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 TRIM31Q9BZY9 425 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 MRM3Q9HC36 420 aaKnown RBP16.42■□□□□ 0.22
IRF1-211ENST00000613424 FTSJ1Q9UET6 329 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 CRLS1Q9UJA2 301 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 PLXNB3Q9ULL4 1909 aa16.42■□□□□ 0.22
IRF1-211ENST00000613424 TRBV5-4A0A0C4DH59 114 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 SPAARA0A1B0GVQ0 90 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 OR51F1A6NGY5 319 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 SDR42E2A6NKP2 422 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 TNFSF14O43557 240 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 GOT2P00505 430 aaKnown RBP16.41■□□□□ 0.22
IRF1-211ENST00000613424 MSH3P20585 1137 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 KCNA4P22459 653 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 AK4P27144 223 aaPredicted RBP16.41■□□□□ 0.22
IRF1-211ENST00000613424 NMBRP28336 390 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 MAGEA3P43357 314 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 CACNG1Q06432 222 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 ILF3Q12906 894 aaKnown RBP eCLIP16.41■□□□□ 0.22
IRF1-211ENST00000613424 PROX2Q3B8N5 592 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 PPM1JQ5JR12 505 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 C6orf132Q5T0Z8 1188 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 ZCCHC8Q6NZY4 707 aaKnown RBP16.41■□□□□ 0.22
IRF1-211ENST00000613424 CES3Q6UWW8 571 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 CHST15Q7LFX5 561 aaPredicted RBP16.41■□□□□ 0.22
IRF1-211ENST00000613424 TAS2R42Q7RTR8 314 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 DGLUCYQ7Z3D6 616 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 NXPE1Q8N323 547 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 RASGEF1AQ8N9B8 481 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 FAM181AQ8N9Y4 354 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 FAM46DQ8NEK8 389 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 SNF8Q96H20 258 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 APOLD1Q96LR9 279 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 ERP44Q9BS26 406 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 GSDMCQ9BYG8 508 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 TREX1Q9NSU2 369 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 SOX13Q9UN79 622 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 SNX24Q9Y343 169 aa16.41■□□□□ 0.22
IRF1-211ENST00000613424 CNOT1A5YKK6 2376 aaKnown RBP16.41■□□□□ 0.22
IRF1-211ENST00000613424 COL5A1P20908 1838 aaPredicted RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 MAGEB16A2A368 324 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 SEC31AO94979 1220 aaKnown RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 MYF5P13349 255 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 FOXN2P32314 431 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 RPL21P46778 160 aaKnown RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 ITGA8P53708 1063 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 PRAMEP78395 509 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 SIM1P81133 766 aaPredicted RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 DNAJC3Q13217 504 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 GTF2H3Q13889 308 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 LRP8Q14114 963 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 MORF4L2Q15014 288 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 FNBP1LQ5T0N5 605 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 HIBCHQ6NVY1 386 aaPredicted RBP16.4■□□□□ 0.22
IRF1-211ENST00000613424 CASC4Q6P4E1 433 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 TMEM220Q6QAJ8 160 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 CRTC3Q6UUV7 619 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 LRRTM4Q86VH4 590 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 SERPINA9Q86WD7 417 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 ZNF547Q8IVP9 402 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 PIANPQ8IYJ0 282 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 AGGF1Q8N302 714 aaeCLIP16.4■□□□□ 0.22
IRF1-211ENST00000613424 OR6P1Q8NGX9 317 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 MFSD3Q96ES6 412 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 SIGLEC10Q96LC7 697 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 BOCQ9BWV1 1114 aa16.4■□□□□ 0.22
IRF1-211ENST00000613424 ZCCHC2Q9C0B9 1178 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms