RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PCDH12Q9NPG4 1184 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 OXSMQ9NWU1 459 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PKD2L2Q9NZM6 624 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 CPSF2Q9P2I0 782 aaKnown RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 THAP10Q9P2Z0 257 aaPredicted RBP8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SUN2Q9UH99 717 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 CRLS1Q9UJA2 301 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PPM1HQ9ULR3 514 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 PCDHB1Q9Y5F3 818 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 NUMBLQ9Y6R0 609 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 SCN8AQ9UQD0 1980 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 F5P12259 2224 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
CCDC47-207ENST00000612558 BPTFQ12830 3046 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF106Q9H2Y7 1883 aaKnown RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ANHXE9PGG2 379 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 KPNA3O00505 521 aaPredicted RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SPINT1O43278 529 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 C1SP09871 688 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 HLA-EP13747 358 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ZNF37AP17032 561 aaPredicted RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 IGFBP4P22692 258 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 RPS3P23396 243 aaKnown RBP eCLIP8.84□□□□□ -0.997e-10■■■■□ 20.1
CCDC47-207ENST00000612558 ACRV1P26436 265 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SLC1A6P48664 564 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SPINT3P49223 89 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SEMG2Q02383 582 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ASPHQ12797 758 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 IFT88Q13099 833 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 HTR4Q13639 388 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ITGA9Q13797 1035 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CHRNA6Q15825 494 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 GLIPR1L2Q4G1C9 344 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CTSL3PQ5NE16 218 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 LIPMQ5VYY2 423 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CES4AQ5XG92 561 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 UGT3A1Q6NUS8 523 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ERAP2Q6P179 960 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 ZCCHC23Q6ZST2 131 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 PIM3Q86V86 326 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CRLF3Q8IUI8 442 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SFTPA1Q8IWL2 248 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 RBFAQ8N0V3 343 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 DTX3LQ8TDB6 740 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 KCNJ9Q92806 393 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CHFRQ96EP1 664 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CDH19Q9H159 772 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 NPHS2Q9NP85 383 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 RAD18Q9NS91 495 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 XPR1Q9UBH6 696 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 CD207Q9UJ71 328 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 MED16Q9Y2X0 877 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 OAS3Q9Y6K5 1087 aaKnown RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 REV3LO60673 3130 aa8.84□□□□□ -0.99
CCDC47-207ENST00000612558 TCF20Q9UGU0 1960 aaKnown RBP8.84□□□□□ -0.99
CCDC47-207ENST00000612558 RGSL1A5PLK6 1076 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 TMEM114B3SHH9 223 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 H3BMM5 538 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 NPC1O15118 1278 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 GPR39O43194 453 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 HNRNPLP14866 589 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC47-207ENST00000612558 CD1DP15813 335 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 UGT1A6P19224 532 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 UGT1A1P22309 533 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 UGT1A4P22310 534 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 ATP5F1P24539 256 aaPredicted RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 ITGB7P26010 798 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 UGT1A3P35503 534 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 UGT1A5P35504 534 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 IL12RB1P42701 662 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 TNFRSF4P43489 277 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 GALK1P51570 392 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 ABCE1P61221 599 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 FOXK2Q01167 660 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 OVGP1Q12889 678 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 SETMARQ53H47 684 aaPredicted RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 TECRLQ5HYJ1 363 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 LRRC73Q5JTD7 316 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 PAQR3Q6TCH7 311 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 DPPA4Q7L190 304 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 PARS2Q7L3T8 475 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 YTHDF3Q7Z739 585 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 DSG4Q86SJ6 1040 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 ISCA2Q86U28 154 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 RAVER1Q8IY67 606 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 NXPE1Q8N323 547 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 NKAPQ8N5F7 415 aaKnown RBP8.83□□□□□ -1
CCDC47-207ENST00000612558 PIP4K2CQ8TBX8 421 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 CSGALNACT1Q8TDX6 532 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 PPP4R1Q8TF05 950 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 ULK4Q96C45 1275 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 CCDC126Q96EE4 140 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 PPP1R16AQ96I34 528 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 FAM129BQ96TA1 746 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 GPR21Q99679 349 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 C20orf27Q9GZN8 174 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 CLPBQ9H078 707 aa8.83□□□□□ -1
CCDC47-207ENST00000612558 SARDHQ9UL12 918 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms