RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BLOC1S3Q6QNY0 202 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 SPESP1Q6UW49 350 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 R3HCC1LQ7Z5L2 792 aaKnown RBP20.25■□□□□ 0.83
SSBP3-216ENST00000610401 KLHDC9Q8NEP7 349 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 NCLNQ969V3 563 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 NSMCE2Q96MF7 247 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 POLE4Q9NR33 117 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 CIDEBQ9UHD4 219 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 CCNA2P20248 432 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 MAGP20916 626 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 POLR2JP52435 117 aaKnown RBP20.25■□□□□ 0.83
SSBP3-216ENST00000610401 TIAL1Q01085 375 aaKnown RBP eCLIP20.25■□□□□ 0.833e-6■■■■□ 20.6
SSBP3-216ENST00000610401 TIGD7Q6NT04 549 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-216ENST00000610401 IL27RAQ6UWB1 636 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 ENPP6Q6UWR7 440 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 TOP1MTQ969P6 601 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 PGAP3Q96FM1 320 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-216ENST00000610401 CATSPERZQ9NTU4 200 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 FAIMQ9NVQ4 179 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 LIMD1Q9UGP4 676 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 KCNH4Q9UQ05 1017 aa20.25■□□□□ 0.83
SSBP3-216ENST00000610401 RASAL1O95294 804 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 IMP4Q96G21 291 aaKnown RBP20.24■□□□□ 0.83
SSBP3-216ENST00000610401 AURKBQ96GD4 344 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-216ENST00000610401 M0QZ92 97 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 NDUFS3O75489 264 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 MTHFRP42898 656 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-216ENST00000610401 RAD23AP54725 363 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 NFATC3Q12968 1075 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ATP6AP1LQ52LC2 224 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ANKS6Q68DC2 871 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 FAM126BQ8IXS8 530 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 PHACTR4Q8IZ21 702 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 OR4L1Q8NH43 312 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 SNX19Q92543 992 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 MYOCQ99972 504 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ZBED2Q9BTP6 218 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ABCC13Q9NSE7 274 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ZNF225Q9UK10 706 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 PCDHGC4Q9Y5F7 938 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 XPNPEP2O43895 674 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 E2F6O75461 281 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 GSNP06396 782 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ODC1P11926 461 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 HRH2P25021 359 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 GDF5P43026 501 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 NR6A1Q15406 480 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 TAS2R42Q7RTR8 314 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 PSD4Q8NDX1 1056 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ITFG1Q8TB96 612 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
SSBP3-216ENST00000610401 EEF1AKMT1Q8WVE0 214 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 ACDQ96AP0 544 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 UHRF1Q96T88 793 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-216ENST00000610401 GMIPQ9P107 970 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 VPS4AQ9UN37 437 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 PCDHA9Q9Y5H5 950 aa20.24■□□□□ 0.83
SSBP3-216ENST00000610401 AQP12BA6NM10 295 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 GSTA4O15217 222 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 G6PDP11413 515 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 BMP1P13497 986 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 PSMD8P48556 350 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 ACADVLP49748 655 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 PTGR1Q14914 329 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 ZRANB3Q5FWF4 1079 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 MRNIPQ6NTE8 343 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 KIAA0408Q6ZU52 694 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 LIMS2Q7Z4I7 341 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 PHYKPLQ8IUZ5 450 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 AQP12AQ8IXF9 295 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 DTWD1Q8N5C7 304 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 OR10A6Q8NH74 314 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 SDR39U1Q9NRG7 319 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-216ENST00000610401 GMEB1Q9Y692 573 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 GPR182O15218 404 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 CACNG3O60359 315 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 PIGAP37287 484 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 MLLT6P55198 1093 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-216ENST00000610401 TBX4P57082 545 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 SEMG2Q02383 582 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 C10orf120Q5SQS8 335 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 FBXL22Q6P050 247 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 C8orf82Q6P1X6 216 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-216ENST00000610401 Q6ZNX1 250 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 GALNT10Q86SR1 603 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 ZNF598Q86UK7 904 aaKnown RBP20.23■□□□□ 0.83
SSBP3-216ENST00000610401 OR7D4Q8NG98 312 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 BIRC8Q96P09 236 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 SACM1LQ9NTJ5 587 aa20.23■□□□□ 0.83
SSBP3-216ENST00000610401 POLR3HQ9Y535 204 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-216ENST00000610401 A0A1W2PP18 115 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 TMEM247A6NEH6 219 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 HS6ST1O60243 411 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 B3GALT4O96024 378 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 IMPDH2P12268 514 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 AXLP30530 894 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 LCP2Q13094 533 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 UPP1Q16831 310 aa20.22■□□□□ 0.83
SSBP3-216ENST00000610401 METTL6Q8TCB7 284 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms