RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF555Q8NEP9 628 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 PJA1Q8NG27 643 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 EXT2Q93063 718 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 POP5Q969H6 163 aaKnown RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 VMP1Q96GC9 406 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 CCDC115Q96NT0 180 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 AARSD1Q9BTE6 412 aaKnown RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 TMEM165Q9HC07 324 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 MARCH4Q9P2E8 410 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ENPP5Q9UJA9 477 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ARNTLO00327 626 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ARSDP51689 593 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 DIO3P55073 304 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 TIAL1Q01085 375 aaKnown RBP eCLIP22.2■■□□□ 1.144e-13■■■□□ 16.6
SHANK2-220ENST00000608988 GNA12Q03113 381 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 BFSP2Q13515 415 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 CCDC92Q53HC0 331 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 NOMO2Q5JPE7 1267 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ANKRD13BQ86YJ7 626 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 PIK3C3Q8NEB9 887 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 TMBIM1Q969X1 311 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 FKBP10Q96AY3 582 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SH3YL1Q96HL8 342 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 C1orf74Q96LT6 269 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SEPHS2Q99611 448 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 UGT2B28Q9BY64 529 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 SOX17Q9H6I2 414 aaPredicted RBP22.2■■□□□ 1.14
SHANK2-220ENST00000608988 BTRCQ9Y297 605 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 NAALAD2Q9Y3Q0 740 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 CPQQ9Y646 472 aa22.2■■□□□ 1.14
SHANK2-220ENST00000608988 ZFC3H1O60293 1989 aaKnown RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 H3BMM5 538 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CNOT3O75175 753 aaKnown RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CD86P42081 329 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 YBX1P67809 324 aaKnown RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CHRNB3Q05901 458 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 C6orf141Q5SZD1 244 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CHST15Q7LFX5 561 aaPredicted RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 R3HCC1LQ7Z5L2 792 aaKnown RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CTU1Q7Z7A3 348 aaKnown RBP22.19■■□□□ 1.14
SHANK2-220ENST00000608988 ZFAND4Q86XD8 727 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 CLEC4FQ8N1N0 589 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 TEX26Q8N6G2 289 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 TMCO5AQ8N6Q1 288 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 PDZD8Q8NEN9 1154 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 BPIFB6Q8NFQ5 453 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 MYLPFQ96A32 169 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 VPS33AQ96AX1 596 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 ALPK1Q96QP1 1244 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 KCNA7Q96RP8 456 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 NT5MQ9NPB1 228 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 PDE10AQ9Y233 779 aa22.19■■□□□ 1.14
SHANK2-220ENST00000608988 LOC285095A0A1B0GVY8 99 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 E9PAM4 449 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 PPP6CO00743 305 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 CD3EAPO15446 510 aaKnown RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 LDB2O43679 373 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 MGEA5O60502 916 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 GMNNO75496 209 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 SLC4A1P02730 911 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 EIF2S1P05198 315 aaKnown RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 SMPD1P17405 629 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 TMED10P49755 219 aaKnown RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 CRYBB1P53674 252 aaPredicted RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 TRIM32Q13049 653 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 SIRPB2Q5JXA9 342 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 MARC1Q5VT66 337 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 CRTC3Q6UUV7 619 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 ZDHHC13Q8IUH4 622 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 RYBPQ8N488 228 aaPredicted RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 SLC22A17Q8WUG5 538 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 NSUN5Q96P11 429 aaKnown RBP22.18■■□□□ 1.14
SHANK2-220ENST00000608988 CSF3RQ99062 836 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 RNF112Q9ULX5 631 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 SNX5Q9Y5X3 404 aa22.18■■□□□ 1.14
SHANK2-220ENST00000608988 LCHNA4D1U4 455 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 TMEM247A6NEH6 219 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 SUPT3HB4E1H0 165 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 C9JVG2 144 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 KLK8O60259 260 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 RSL1D1O76021 490 aaKnown RBP22.17■■□□□ 1.14
SHANK2-220ENST00000608988 MMP2P08253 660 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 APLP1P51693 650 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 OR4D2P58180 307 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 PRKG2Q13237 762 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 IL18R1Q13478 541 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 FUT11Q495W5 492 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 OTUD3Q5T2D3 398 aaPredicted RBP22.17■■□□□ 1.14
SHANK2-220ENST00000608988 IQSEC1Q6DN90 963 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 FAM171BQ6P995 826 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 ITIH5Q86UX2 942 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 ITFG1Q8TB96 612 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 TMEM40Q8WWA1 233 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 TAMM41Q96BW9 452 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 FAM118AQ9NWS6 357 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 DNAJB9Q9UBS3 223 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 DAPK2Q9UIK4 370 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 CRYL1Q9Y2S2 319 aa22.17■■□□□ 1.14
SHANK2-220ENST00000608988 ANKRD36A6QL64 1941 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms