RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PPP2R2CQ9Y2T4 447 aa14.32□□□□□ -0.12
HDDC2-204ENST00000608295 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
HDDC2-204ENST00000608295 PDZK1P1A8MUH7 402 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NTN3O00634 580 aaPredicted RBP14.31□□□□□ -0.12
HDDC2-204ENST00000608295 LIASO43766 372 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NUAK1O60285 661 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 PRAMEF1O95521 474 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 ETS1P14921 441 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 MPSTP25325 297 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 ADRA1AP35348 466 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 HMGCLP35914 325 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 TERF1P54274 439 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 GTF2H3Q13889 308 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 POU6F1Q14863 301 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 OGFOD3Q6PK18 319 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 USP53Q70EK8 1073 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NLRP8Q86W28 1048 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
HDDC2-204ENST00000608295 PLEKHG4BQ96PX9 1271 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NUDT22Q9BRQ3 303 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NRSN2Q9GZP1 204 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 CARD9Q9H257 536 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 FAM96AQ9H5X1 160 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 PRDM8Q9NQV8 689 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 NFKBIL1Q9UBC1 381 aaPredicted RBP14.31□□□□□ -0.12
HDDC2-204ENST00000608295 SLC23A2Q9UGH3 650 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 ZNF148Q9UQR1 794 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 PKD1L2Q7Z442 2459 aa14.31□□□□□ -0.12
HDDC2-204ENST00000608295 ANKRD11Q6UB99 2663 aaPredicted RBP14.3□□□□□ -0.12
HDDC2-204ENST00000608295 DMXL2Q8TDJ6 3036 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 C5orf60A6NFR6 353 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 OR2AG2A6NM03 316 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 GAPDHSO14556 408 aaPredicted RBP14.3□□□□□ -0.12
HDDC2-204ENST00000608295 PPM1DO15297 605 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 TCEA3O75764 348 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 CDK14O94921 469 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 EPOP01588 193 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 ITPKBP27987 946 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 DRG2P55039 364 aaKnown RBP14.3□□□□□ -0.12
HDDC2-204ENST00000608295 INHBCP55103 352 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 LRP8Q14114 963 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 RTP5Q14D33 572 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 GPRC6AQ5T6X5 926 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 LRRTM4Q86VH4 590 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 GLIS1Q8NBF1 620 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 RCBTB1Q8NDN9 531 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 TTC25Q96NG3 672 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
HDDC2-204ENST00000608295 SEMA6CQ9H3T2 930 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 POLR1BQ9H9Y6 1135 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 TRIM39Q9HCM9 518 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■□□□□ 10.6
HDDC2-204ENST00000608295 TMEM9Q9P0T7 183 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 ADAMTS20P59510 1910 aa14.3□□□□□ -0.12
HDDC2-204ENST00000608295 CELSR3Q9NYQ7 3312 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 URB1O60287 2271 aaKnown RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 B4GAT1O43505 415 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 NUDT21O43809 227 aaKnown RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 CEP104O60308 925 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 ZSCAN5DPP0CG00 497 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 PRSS56P0CW18 603 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 ITIH1P19827 911 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 LPOP22079 712 aaPredicted RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 RPL10P27635 214 aaKnown RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 CSF2RBP32927 897 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 LMAN1P49257 510 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 HHEXQ03014 270 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 TAF1AQ15573 450 aaPredicted RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 COL28A1Q2UY09 1125 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 TBC1D25Q3MII6 688 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 DENND5AQ6IQ26 1287 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 RANBP10Q6VN20 620 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 JAMLQ86YT9 394 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 RAVER1Q8IY67 606 aaKnown RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 BEND7Q8N7W2 519 aaPredicted RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 OR6C4Q8NGE1 309 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 DNAJC1Q96KC8 554 aaKnown RBP14.29□□□□□ -0.12
HDDC2-204ENST00000608295 SLC38A3Q99624 504 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 TLR10Q9BXR5 811 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 KCNK4Q9NYG8 393 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 PISDQ9UG56 409 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 CRLS1Q9UJA2 301 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 APPL1Q9UKG1 709 aa14.29□□□□□ -0.12
HDDC2-204ENST00000608295 ZZEF1O43149 2961 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 CCDC187A0A096LP49 1063 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 PRAMEF33A0A0G2JMD5 474 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 C2orf81A6NN90 581 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 E7EVH7 732 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 TNFSF15O95150 251 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 FGGP02679 453 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 ZNF7P17097 686 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 ACTN2P35609 894 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 EIF2S3P41091 472 aaKnown RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 ZNF140P52738 457 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 CTSCP53634 463 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
HDDC2-204ENST00000608295 TMEM115Q12893 351 aaPredicted RBP14.28□□□□□ -0.12
HDDC2-204ENST00000608295 OASLQ15646 514 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms