RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CDH6P55285 790 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 GNA12Q03113 381 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 DPYSL3Q14195 570 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 DEFB109BQ30KR1 87 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 KRTAP21-3Q3LHN1 58 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 C11orf63Q6NUN7 778 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 SPRED1Q7Z699 444 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 ZSCAN30Q86W11 494 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 CACNA2D3Q8IZS8 1091 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 LRRC57Q8N9N7 239 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 DENND6BQ8NEG7 585 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 GPR156Q8NFN8 814 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 KRT35Q92764 455 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 PPP1R16AQ96I34 528 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
HLA-F-230ENST00000606273 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-230ENST00000606273 LUC7LQ9NQ29 371 aaKnown RBP12.17□□□□□ -0.46
HLA-F-230ENST00000606273 AKAP7Q9P0M2 348 aaPredicted RBP12.17□□□□□ -0.46
HLA-F-230ENST00000606273 VPS51Q9UID3 782 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 OAS3Q9Y6K5 1087 aaKnown RBP12.17□□□□□ -0.46
HLA-F-230ENST00000606273 CAPN6Q9Y6Q1 641 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
HLA-F-230ENST00000606273 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 TSPAN6O43657 245 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 ZNF821O75541 412 aaPredicted RBP12.16□□□□□ -0.46
HLA-F-230ENST00000606273 CD160O95971 181 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 CTSEP14091 401 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 KDELR1P24390 212 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
HLA-F-230ENST00000606273 SLC1A1P43005 524 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 HCAR3P49019 387 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 BLKP51451 505 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 HK3P52790 923 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 GP2P55259 537 aaKnown RBP12.16□□□□□ -0.46
HLA-F-230ENST00000606273 ARF5P84085 180 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 SEPT6Q14141 434 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 HADHQ16836 314 aaKnown RBP12.16□□□□□ -0.46
HLA-F-230ENST00000606273 AFMIDQ63HM1 303 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 TCTN3Q6NUS6 607 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 OGFOD3Q6PK18 319 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 LEKR1Q6ZMV7 388 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 DPY19L3Q6ZPD9 716 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 ARHGAP36Q6ZRI8 547 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 DAAM2Q86T65 1068 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 KRTAP1-3Q8IUG1 177 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 ARHGAP12Q8IWW6 846 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 UMODL1-AS1Q8N2C9 162 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 PQLC3Q8N755 202 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
HLA-F-230ENST00000606273 HMCESQ96FZ2 354 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 TMPRSS13Q9BYE2 586 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 SLC39A8Q9C0K1 460 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 LCMT1Q9UIC8 334 aa12.16□□□□□ -0.46
HLA-F-230ENST00000606273 LOC100289279A0A1B0GTE1 492 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 RASA4BC9J798 803 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 DAPK3O43293 454 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 RASA4O43374 803 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 B4GAT1O43505 415 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 SPOPO43791 374 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 RAD1O60671 282 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 PALMO75781 387 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 NAP1L1P55209 391 aaKnown RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 B4GALNT1Q00973 533 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 CDC20Q12834 499 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 KRT81Q14533 505 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 TCEA2Q15560 299 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 CERCAMQ5T4B2 595 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 MACC1Q6ZN28 852 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 PIM3Q86V86 326 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 GKN2Q86XP6 184 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 HID1Q8IV36 788 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 RHOT1Q8IXI2 618 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 DCAF4L2Q8NA75 395 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 KCTD6Q8NC69 237 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 CPT1CQ8TCG5 803 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 TSACCQ96A04 125 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 TNKS2Q9H2K2 1166 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 CATSPERBQ9H7T0 1116 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 RDH14Q9HBH5 336 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 ATP13A1Q9HD20 1204 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 CASS4Q9NQ75 786 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 MBNL1Q9NR56 388 aaKnown RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 DONSONQ9NYP3 566 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 LRIT1Q9P2V4 623 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 GUCA1BQ9UMX6 200 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 PACSIN2Q9UNF0 486 aaPredicted RBP12.15□□□□□ -0.46
HLA-F-230ENST00000606273 PPP2R2CQ9Y2T4 447 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 B3GALT1Q9Y5Z6 326 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 C2CD3Q4AC94 2353 aa12.15□□□□□ -0.46
HLA-F-230ENST00000606273 NYNRINQ9P2P1 1898 aaKnown RBP12.14□□□□□ -0.47
HLA-F-230ENST00000606273 SCN8AQ9UQD0 1980 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms