RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 CHDHQ8NE62 594 aaPredicted RBP14.08□□□□□ -0.16
TRIM11-205ENST00000602308 TBC1D31Q96DN5 1066 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 FER1L6-AS2Q96M78 137 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 LRFN5Q96NI6 719 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 AGAP2Q99490 1192 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 FOXC2Q99958 501 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 ENKD1Q9H0I2 346 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 SYNCQ9H7C4 482 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 UPF2Q9HAU5 1272 aaKnown RBP14.08□□□□□ -0.16
TRIM11-205ENST00000602308 PDFQ9HBH1 243 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 EPHA6Q9UF33 1036 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 CD84Q9UIB8 345 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 PCDHGC3Q9UN70 934 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 CACNA1CQ13936 2221 aa14.08□□□□□ -0.16
TRIM11-205ENST00000602308 FLNAP21333 2647 aaKnown RBP14.08□□□□□ -0.16
TRIM11-205ENST00000602308 CCDC78A2IDD5 438 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 TRIM49BA6NDI0 452 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 J3KR12 359 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 CREB3O43889 395 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 FOSL1P15407 271 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 XRCC1P18887 633 aaPredicted RBP14.07□□□□□ -0.16
TRIM11-205ENST00000602308 VIPR1P32241 457 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 SLC19A1P41440 591 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
TRIM11-205ENST00000602308 SOX8P57073 446 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 CSNK1G2P78368 415 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 PAK1Q13153 545 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 PTPRRQ15256 657 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 B3GNTL1Q67FW5 361 aaPredicted RBP14.07□□□□□ -0.16
TRIM11-205ENST00000602308 FCRL6Q6DN72 434 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 ZDHHC17Q8IUH5 632 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 BCORP1Q8N888 145 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 AVL9Q8NBF6 648 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 NRGNQ92686 78 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 COX14Q96I36 57 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 TMEM121Q9BTD3 319 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 ABCG8Q9H221 673 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 KCND1Q9NSA2 647 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 ZNF624Q9P2J8 865 aaPredicted RBP14.07□□□□□ -0.16
TRIM11-205ENST00000602308 SH3BGRL2Q9UJC5 107 aa14.07□□□□□ -0.16
TRIM11-205ENST00000602308 BECN2A8MW95 431 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 ASMTLO95671 621 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 VIPP01282 170 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 JCHAINP01591 159 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 ATP1A1P05023 1023 aaKnown RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 AGAP20933 346 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 RORAP35398 523 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 YBEYP58557 167 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 GPR19Q15760 415 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 FAM102AQ5T9C2 384 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 IGFL2Q6UWQ7 119 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 GFRALQ6UXV0 394 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 TSPAN33Q86UF1 283 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 PIAS4Q8N2W9 510 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 RTL3Q8N8U3 475 aaKnown RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 UBXN4Q92575 508 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 SCAMP4Q969E2 229 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 CCDC47Q96A33 483 aaKnown RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 ZNF501Q96CX3 271 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 CNDP1Q96KN2 507 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 SMR3AQ99954 134 aa14.06□□□□□ -0.16
TRIM11-205ENST00000602308 UBE2TQ9NPD8 197 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 NCOA6Q14686 2063 aaPredicted RBP14.06□□□□□ -0.16
TRIM11-205ENST00000602308 SPTBP11277 2137 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 CLDN14O95500 239 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 ME1P48163 572 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 PMS1P54277 932 aaKnown RBP14.05□□□□□ -0.16
TRIM11-205ENST00000602308 SNX16P57768 344 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 TUBB4BP68371 445 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 ATP11AP98196 1134 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
TRIM11-205ENST00000602308 TUBB2AQ13885 445 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 NCF4Q15080 339 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 AP2M1Q96CW1 435 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 ZNF396Q96N95 335 aaPredicted RBP14.05□□□□□ -0.16
TRIM11-205ENST00000602308 TREX2Q9BQ50 279 aaPredicted RBP14.05□□□□□ -0.16
TRIM11-205ENST00000602308 TUBB2BQ9BVA1 445 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 RAB33BQ9H082 229 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 PLCB1Q9NQ66 1216 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 TNFRSF10DQ9UBN6 386 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 SEC16AO15027 2179 aa14.05□□□□□ -0.16
TRIM11-205ENST00000602308 FAM170AA1A519 330 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 NPIPB15A6NHN6 443 aaPredicted RBP14.04□□□□□ -0.16
TRIM11-205ENST00000602308 WASH4PA8MWX3 477 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 PSMD11O00231 422 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 FANCGO15287 622 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 P4HA2O15460 535 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 KLF7O75840 302 aaPredicted RBP14.04□□□□□ -0.16
TRIM11-205ENST00000602308 ARCN1P48444 511 aaKnown RBP14.04□□□□□ -0.16
TRIM11-205ENST00000602308 CETN1Q12798 172 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 CUL4AQ13619 759 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 PARP15Q460N3 678 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 TMEM198Q66K66 360 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 TMEM207Q6UWW9 146 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 MEX3BQ6ZN04 569 aaKnown RBP14.04□□□□□ -0.16
TRIM11-205ENST00000602308 D2HGDHQ8N465 521 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 COG1Q8WTW3 980 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
TRIM11-205ENST00000602308 PCMTD1Q96MG8 357 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms