RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TEAD1P28347 426 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 GP5P40197 560 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 CCNFP41002 786 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 GPR1P46091 355 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 SPINT3P49223 89 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 CSNK1EP49674 416 aaKnown RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 DCDC1P59894 354 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 SLC18A2Q05940 514 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 DPTQ07507 201 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 SPEM2Q0P670 501 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 MPP2Q14168 576 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 FGL2Q14314 439 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 CSRP2Q16527 193 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 WSCD2Q2TBF2 565 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 PACS1Q6VY07 963 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TIFABQ6ZNK6 161 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 Q6ZVL8 140 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TECPR1Q7Z6L1 1165 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 ABI3BPQ7Z7G0 1075 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 C4orf33Q8N1A6 199 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TP53I13Q8NBR0 393 aaPredicted RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 C1orf216Q8TAB5 229 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 APOPT1Q96IL0 206 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 PLEKHG4BQ96PX9 1271 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 ORAI3Q9BRQ5 295 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 ZSCAN5AQ9BUG6 496 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 FAM83DQ9H4H8 585 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 WDR26Q9H7D7 661 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 EBF2Q9HAK2 575 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 PPANQ9NQ55 473 aaKnown RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 PHPT1Q9NRX4 125 aaPredicted RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 SEMA4GQ9NTN9 838 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 TMEM74BQ9NUR3 256 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 MKS1Q9NXB0 559 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 NFKBIL1Q9UBC1 381 aaPredicted RBP10.01□□□□□ -0.81
UPF1-213ENST00000601981 SPO11Q9Y5K1 396 aa10.01□□□□□ -0.81
UPF1-213ENST00000601981 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
UPF1-213ENST00000601981 GPR179Q6PRD1 2367 aa10□□□□□ -0.81
UPF1-213ENST00000601981 TLR4O00206 839 aa10□□□□□ -0.81
UPF1-213ENST00000601981 TM9SF1O15321 606 aa10□□□□□ -0.81
UPF1-213ENST00000601981 YKT6O15498 198 aa10□□□□□ -0.81
UPF1-213ENST00000601981 UGT1A9O60656 530 aa10□□□□□ -0.81
UPF1-213ENST00000601981 SPAG7O75391 227 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ERVK-10P10266 1014 aa10□□□□□ -0.81
UPF1-213ENST00000601981 PAMP19021 973 aa10□□□□□ -0.81
UPF1-213ENST00000601981 NMBRP28336 390 aa10□□□□□ -0.81
UPF1-213ENST00000601981 IGFALSP35858 605 aa10□□□□□ -0.81
UPF1-213ENST00000601981 SPAM1P38567 509 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ARRB1P49407 418 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 CSE1LP55060 971 aaKnown RBP10□□□□□ -0.81
UPF1-213ENST00000601981 CLDN2P57739 230 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ITGA9Q13797 1035 aa10□□□□□ -0.81
UPF1-213ENST00000601981 POU6F1Q14863 301 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CDKN3Q16667 212 aa10□□□□□ -0.81
UPF1-213ENST00000601981 AASDHQ4L235 1098 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 GRTP1Q5TC63 336 aa10□□□□□ -0.81
UPF1-213ENST00000601981 KIAA0930Q6ICG6 404 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 PNCKQ6P2M8 343 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CES3Q6UWW8 571 aa10□□□□□ -0.81
UPF1-213ENST00000601981 GCNT7Q6ZNI0 430 aa10□□□□□ -0.81
UPF1-213ENST00000601981 Q6ZSR6 202 aa10□□□□□ -0.81
UPF1-213ENST00000601981 SH2D5Q6ZV89 423 aa10□□□□□ -0.81
UPF1-213ENST00000601981 KCNMB4Q86W47 210 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CNTN4Q8IWV2 1026 aa10□□□□□ -0.81
UPF1-213ENST00000601981 UNC5BQ8IZJ1 945 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CBARPQ8N350 705 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 TRAM1L1Q8N609 369 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ANKRD42Q8N9B4 389 aa10□□□□□ -0.81
UPF1-213ENST00000601981 BANPQ8N9N5 519 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ACMSDQ8TDX5 336 aa10□□□□□ -0.81
UPF1-213ENST00000601981 DENND1AQ8TEH3 1009 aa10□□□□□ -0.81
UPF1-213ENST00000601981 DYDC1Q8WWB3 177 aa10□□□□□ -0.81
UPF1-213ENST00000601981 PEX13Q92968 403 aa10□□□□□ -0.81
UPF1-213ENST00000601981 MFSD3Q96ES6 412 aa10□□□□□ -0.81
UPF1-213ENST00000601981 SMIM14Q96QK8 99 aa10□□□□□ -0.81
UPF1-213ENST00000601981 KLF6Q99612 283 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 SPATA16Q9BXB7 569 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ABCG8Q9H221 673 aa10□□□□□ -0.81
UPF1-213ENST00000601981 UGT1A7Q9HAW7 530 aa10□□□□□ -0.81
UPF1-213ENST00000601981 UGT1A10Q9HAW8 530 aa10□□□□□ -0.81
UPF1-213ENST00000601981 UGT1A8Q9HAW9 530 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CAPN10Q9HC96 672 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CHRAC1Q9NRG0 131 aa10□□□□□ -0.81
UPF1-213ENST00000601981 TREX1Q9NSU2 369 aa10□□□□□ -0.81
UPF1-213ENST00000601981 C20orf96Q9NUD7 363 aaPredicted RBP10□□□□□ -0.81
UPF1-213ENST00000601981 TXNDC16Q9P2K2 825 aa10□□□□□ -0.81
UPF1-213ENST00000601981 CD84Q9UIB8 345 aa10□□□□□ -0.81
UPF1-213ENST00000601981 APPL1Q9UKG1 709 aa10□□□□□ -0.81
UPF1-213ENST00000601981 ANKRD6Q9Y2G4 727 aa10□□□□□ -0.81
UPF1-213ENST00000601981 PCDH15Q96QU1 1955 aa10□□□□□ -0.81
UPF1-213ENST00000601981 EP300Q09472 2414 aaPredicted RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 CABIN1Q9Y6J0 2220 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 DCHS1Q96JQ0 3298 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 ZFC3H1O60293 1989 aaKnown RBP9.99□□□□□ -0.81
UPF1-213ENST00000601981 GLYATL1P3A0A0U1RQE8 302 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 A0A1B0GVT2 93 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 A0A1W2PR77 199 aa9.99□□□□□ -0.81
UPF1-213ENST00000601981 GMNCA6NCL1 334 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms