RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TPH1P17752 444 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 FDFT1P37268 417 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 RPIAP49247 311 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 TARDBPQ13148 414 aaKnown RBP eCLIP15.56■□□□□ 0.08
RPS28-203ENST00000600659 NR1D2Q14995 579 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 CYP1B1Q16678 543 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 XKR5Q6UX68 686 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 ZNF438Q7Z4V0 828 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 OR52K1Q8NGK4 314 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 MAPK15Q8TD08 544 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 PBKQ96KB5 322 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 DNAJC1Q96KC8 554 aaKnown RBP15.56■□□□□ 0.08
RPS28-203ENST00000600659 OSBPL9Q96SU4 736 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 RAB6BQ9NRW1 208 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 EVA1BQ9NVM1 165 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 PAK5Q9P286 719 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 SLC23A2Q9UGH3 650 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 SNX12Q9UMY4 172 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 CLCA2Q9UQC9 943 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 KCNK6Q9Y257 313 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 PCDHB1Q9Y5F3 818 aa15.56■□□□□ 0.08
RPS28-203ENST00000600659 KMT2BQ9UMN6 2715 aaPredicted RBP15.56■□□□□ 0.08
RPS28-203ENST00000600659 A0A1W2PNU3 283 aaPredicted RBP15.55■□□□□ 0.08
RPS28-203ENST00000600659 C2orf81A6NN90 581 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ERI2A8K979 691 aaKnown RBP15.55■□□□□ 0.08
RPS28-203ENST00000600659 GPR89AB7ZAQ6 455 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 H7C0S8 307 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ZNF185O15231 689 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 PSMD3O43242 534 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 VEGFDO43915 354 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 PRAMEF1O95521 474 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ECEL1O95672 775 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 PROS1P07225 676 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 GPR89BP0CG08 455 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ACP5P13686 325 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 CTSCP53634 463 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 B4GALNT1Q00973 533 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 POU6F1Q14863 301 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 GPRC6AQ5T6X5 926 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ZNF534Q76KX8 674 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 CHST15Q7LFX5 561 aaPredicted RBP15.55■□□□□ 0.08
RPS28-203ENST00000600659 KDF1Q8NAX2 398 aaPredicted RBP15.55■□□□□ 0.08
RPS28-203ENST00000600659 ANP32BQ92688 251 aaKnown RBP15.55■□□□□ 0.08
RPS28-203ENST00000600659 CASS4Q9NQ75 786 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 TBC1D29Q9UFV1 150 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 ZNHIT2Q9UHR6 403 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 APPL1Q9UKG1 709 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 NEU2Q9Y3R4 380 aa15.55■□□□□ 0.08
RPS28-203ENST00000600659 MROH6A6NGR9 719 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 SGTAO43765 313 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 NUDT21O43809 227 aaKnown RBP15.54■□□□□ 0.08
RPS28-203ENST00000600659 KIF5CO60282 957 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 SRP72O76094 671 aaKnown RBP15.54■□□□□ 0.08
RPS28-203ENST00000600659 CDK14O94921 469 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 CRTAMO95727 393 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 PRSS56P0CW18 603 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 JUPP14923 745 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 PNLIPP16233 465 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 GLB1P16278 677 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 ARSDP51689 593 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 CLCNKAP51800 687 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 TMEM115Q12893 351 aaPredicted RBP15.54■□□□□ 0.08
RPS28-203ENST00000600659 NFATC2Q13469 925 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 ITGA9Q13797 1035 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 CRTC3Q6UUV7 619 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 SPRED1Q7Z699 444 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 SFRP1Q8N474 314 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 ARL14Q8N4G2 192 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 CCDC89Q8N998 374 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 RASGEF1AQ8N9B8 481 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 ZNF398Q8TD17 642 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 ACTRT1Q8TDG2 376 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 AP1M1Q9BXS5 423 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 NLE1Q9NVX2 485 aaPredicted RBP15.54■□□□□ 0.08
RPS28-203ENST00000600659 ZZEF1O43149 2961 aa15.54■□□□□ 0.08
RPS28-203ENST00000600659 TRBV5-4A0A0C4DH59 114 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 TCRBV7S3A2A0A539 114 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 TRABD2BA6NFA1 517 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 CES2O00748 559 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 PPM1DO15297 605 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 CCL7P80098 99 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 TMPRSS15P98073 1019 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 CDH17Q12864 832 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 PLA2G4EQ3MJ16 856 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 TMPRSS9Q7Z410 1059 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 LRRTM4Q86VH4 590 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 OR6C4Q8NGE1 309 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 SLC37A2Q8TED4 501 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 NAT14Q8WUY8 206 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 TIMM29Q9BSF4 260 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 EIF2B3Q9NR50 452 aaKnown RBP15.53■□□□□ 0.08
RPS28-203ENST00000600659 LRIT1Q9P2V4 623 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 ENTPD2Q9Y5L3 495 aa15.53■□□□□ 0.08
RPS28-203ENST00000600659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.53■□□□□ 0.082e-16■■□□□ 11.8
RPS28-203ENST00000600659 PGRMC1O00264 195 aaKnown RBP15.52■□□□□ 0.08
RPS28-203ENST00000600659 TAF4O00268 1085 aa15.52■□□□□ 0.08
RPS28-203ENST00000600659 B4GAT1O43505 415 aa15.52■□□□□ 0.08
RPS28-203ENST00000600659 CSO75390 466 aaKnown RBP15.52■□□□□ 0.08
RPS28-203ENST00000600659 TCEA3O75764 348 aa15.52■□□□□ 0.08
RPS28-203ENST00000600659 APRTP07741 180 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms