RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 NADK2Q4G0N4 442 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 CARD16Q5EG05 197 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 NKAIN2Q5VXU1 208 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 SPATA4Q8NEY3 305 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 CXorf40AQ8TE69 158 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 C1orf54Q8WWF1 131 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 FATE1Q969F0 183 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 HAUS1Q96CS2 278 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 HDAC11Q96DB2 347 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 HMCESQ96FZ2 354 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 RBM15Q96T37 977 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 EFHD1Q9BUP0 239 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 BRD8Q9H0E9 1235 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 LUZP4Q9P127 313 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 TLK1Q9UKI8 766 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 DRG1Q9Y295 367 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 MAP4K5Q9Y4K4 846 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
SHKBP1-218ENST00000598907 CXorf51AA0A1B0GTR3 108 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ARHGAP42A6NI28 874 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 RHPN2P1A8MT19 583 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 HACD1B0YJ81 288 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 KDELR3O43731 214 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 NUDT21O43809 227 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 MAFKO60675 156 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 PHF2O75151 1096 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ZMPSTE24O75844 475 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 DNAJB5O75953 348 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 MAP3K6O95382 1288 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 TNFP01375 233 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 UGT2B4P06133 528 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 RBP3P10745 1247 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ITIH2P19823 946 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 CCNCP24863 283 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 MAP4P27816 1152 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ETFBP38117 255 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 SERPINH1P50454 418 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 EIF3EP60228 445 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 BIRC2Q13490 618 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 PRKD1Q15139 912 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 TTC27Q6P3X3 843 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 TIPARPQ7Z3E1 657 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 TMEM135Q86UB9 458 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 PCDH20Q8N6Y1 951 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ATG4AQ8WYN0 398 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 RAB7BQ96AH8 199 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 QKIQ96PU8 341 aaKnown RBP eCLIP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 FAM118BQ9BPY3 351 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 SUDS3Q9H7L9 328 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 PDFQ9HBH1 243 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 MRPL40Q9NQ50 206 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 TMEM9Q9P0T7 183 aa13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 HECAQ9UBI9 543 aaPredicted RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 OAS3Q9Y6K5 1087 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-218ENST00000598907 ANKRD36A6QL64 1941 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 GOLGA6L10A0A0M3HER8 536 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 DFFAO00273 331 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 PEX11BO96011 259 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 PCCBP05166 539 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 CSF2RBP32927 897 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 COILP38432 576 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 LIMK2P53671 638 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 RAB15P59190 212 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 IL10RBQ08334 325 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 ERV3-1Q14264 604 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 ZNF805Q5CZA5 627 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 OGFOD3Q6PK18 319 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 ARHGAP36Q6ZRI8 547 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 CEP112Q8N8E3 955 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 CCL4L1Q8NHW4 92 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 OR1E3Q8WZA6 343 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 RTP4Q96DX8 246 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 WDR92Q96MX6 357 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 UNKQ9C0B0 810 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 CYP4F12Q9HCS2 524 aa13.82□□□□□ -0.2
SHKBP1-218ENST00000598907 PDZD2O15018 2839 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 J3KR12 359 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 TOR1BO14657 336 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 PRAMEF11O60813 436 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 CD160O95971 181 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 FNTAP49354 379 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 ABHD18Q0P651 414 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 INPP5AQ14642 412 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 LRRC14Q15048 493 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 RETSATQ6NUM9 610 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 ATL2Q8NHH9 583 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 LRRN4Q8WUT4 740 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 TFB1MQ8WVM0 346 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 MAML1Q92585 1016 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 SLCO2A1Q92959 643 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 APOOQ9BUR5 198 aa13.81□□□□□ -0.2
SHKBP1-218ENST00000598907 CARD6Q9BX69 1037 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms