RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 IL17CQ9P0M4 197 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 SATB2Q9UPW6 733 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 AAR2Q9Y312 384 aaKnown RBP14.94□□□□□ -0.02
TRIM28-205ENST00000595028 UNC79Q9P2D8 2635 aa14.94□□□□□ -0.02
TRIM28-205ENST00000595028 A0A1W2PNU3 283 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 C5orf60A6NFR6 353 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 GRID2O43424 1007 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 DXOO77932 396 aaKnown RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ACP5P13686 325 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF8P17098 575 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ACTN2P35609 894 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 OLIG2Q13516 323 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ATP13A5Q4VNC0 1218 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 RANBP10Q6VN20 620 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF662Q6ZS27 426 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ARHGEF18Q6ZSZ5 1173 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 CHST15Q7LFX5 561 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 B3GNT8Q7Z7M8 397 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ADGRG6Q86SQ4 1221 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 LSMEM2Q8N112 164 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 FAM71DQ8N9W8 422 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 DTX3LQ8TDB6 740 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 LIN37Q96GY3 246 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 FCRL3Q96P31 734 aaPredicted RBP14.93□□□□□ -0.02
TRIM28-205ENST00000595028 ALS2CR12Q96Q35 445 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 APOL2Q9BQE5 337 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 TRIM39Q9HCM9 518 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 IL26Q9NPH9 171 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 TMPRSS11EQ9UL52 423 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 KCNK6Q9Y257 313 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 COL12A1Q99715 3063 aa14.93□□□□□ -0.02
TRIM28-205ENST00000595028 COL6A6A6NMZ7 2263 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 CCDC187A0A096LP49 1063 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 GLYATL1P3A0A0U1RQE8 302 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 A6NCN8 305 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 RHPN2P1A8MT19 583 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 CHUKO15111 745 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 PPFIA2O75334 1257 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 EML2O95834 649 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 CCKBRP32239 447 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 FASLGP48023 281 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 INHBCP55103 352 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 GDF10P55107 478 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 B4GALNT1Q00973 533 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 CFHR1Q03591 330 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 BIRC2Q13490 618 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 KHDC1Q4VXA5 237 aaKnown RBP14.92□□□□□ -0.02
TRIM28-205ENST00000595028 IGF2-ASQ6U949 168 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 CRTC3Q6UUV7 619 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 SFRP1Q8N474 314 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 WDR36Q8NI36 951 aaKnown RBP14.92□□□□□ -0.02
TRIM28-205ENST00000595028 SLC37A2Q8TED4 501 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 ATG4AQ8WYN0 398 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 TBL1YQ9BQ87 522 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 FOXP3Q9BZS1 431 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 EPB41L5Q9HCM4 733 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 ASCL3Q9NQ33 180 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 ATXN7L1Q9ULK2 861 aaPredicted RBP14.92□□□□□ -0.02
TRIM28-205ENST00000595028 PKP3Q9Y446 797 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 PCDHGA8Q9Y5G5 932 aa14.92□□□□□ -0.02
TRIM28-205ENST00000595028 AHCTF1Q8WYP5 2266 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 PMS2P1A4D2B8 440 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 TMX2-CTNND1H3BSU7 103 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 GAPDHSO14556 408 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 STX7O15400 261 aaKnown RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 GPR39O43194 453 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 BUD23O43709 281 aaKnown RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 NRDCO43847 1150 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 VEGFDO43915 354 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 MTX2O75431 263 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 EIF2S3P41091 472 aaKnown RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 GPR3P46089 330 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 CLCNKAP51800 687 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 OR1D5P58170 312 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 EIF3IQ13347 325 aaKnown RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 RPS6KA1Q15418 735 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 TAF1AQ15573 450 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 CHRNA6Q15825 494 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 P3H1Q32P28 736 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 MAP9Q49MG5 647 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 MEI1Q5TIA1 1274 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 PCSK4Q6UW60 755 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 FAM151BQ6UXP7 276 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 LRRC69Q6ZNQ3 347 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 LRRTM4Q86VH4 590 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 SLC13A5Q86YT5 568 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 FGF11Q92914 225 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 RTP4Q96DX8 246 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 ZNF578Q96N58 590 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 TMEM74Q96NL1 305 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 TMEM121Q9BTD3 319 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 LZTFL1Q9NQ48 299 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 TBC1D29Q9UFV1 150 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 FEZ2Q9UHY8 353 aaPredicted RBP14.91□□□□□ -0.02
TRIM28-205ENST00000595028 ARL5AQ9Y689 179 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 PTPN13Q12923 2485 aa14.91□□□□□ -0.02
TRIM28-205ENST00000595028 C2orf81A6NN90 581 aa14.9□□□□□ -0.02
TRIM28-205ENST00000595028 PPM1DO15297 605 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms