RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CLIC3O95833 236 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 BCL10O95999 233 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 C1RP00736 705 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 OCM2P0CE71 109 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 OCMP0CE72 109 aaPredicted RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 RAP2AP10114 183 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 CD9P21926 228 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 MAP4P27816 1152 aaKnown RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 GSTM2P28161 218 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 CPT1AP50416 773 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 MAXP61244 160 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 YBX1P67809 324 aaKnown RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 TSPY1Q01534 308 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 RELAQ04206 551 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 RAD51Q06609 339 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 SKIV2LQ15477 1246 aaKnown RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 TGFBIQ15582 683 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 TTC23Q5W5X9 447 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 NIPAL1Q6NVV3 410 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 TLK2Q86UE8 772 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 GALNT13Q8IUC8 556 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 CHCHD4Q8N4Q1 142 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 NKAPQ8N5F7 415 aaKnown RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 OR4L1Q8NH43 312 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 HPS4Q9NQG7 708 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 TLR9Q9NR96 1032 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 PSME2Q9UL46 239 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
VRK3-209ENST00000594948 TRPV2Q9Y5S1 764 aa13.14□□□□□ -0.31
VRK3-209ENST00000594948 FUOMA2VDF0 154 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 UPK1AO00322 258 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 SULT1C4O75897 302 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 DDNO94850 711 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 THRBP10828 461 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 NCK1P16333 377 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CD247P20963 164 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PSMA3P25788 255 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PBX3P40426 434 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 BCAP31P51572 246 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 APLP1P51693 650 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 BMXP51813 675 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 UFM1P61960 85 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 MRPS6P82932 125 aaKnown RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 BNIP3Q12983 259 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TOP3AQ13472 1001 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 SEMA3AQ14563 771 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 NEDD8Q15843 81 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 FAM219BQ5XKK7 198 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 FAM43BQ6ZT52 329 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 THAP5Q7Z6K1 395 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 IFNEQ86WN2 208 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 NPLOC4Q8TAT6 608 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PPP1R13LQ8WUF5 828 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CCDC115Q96NT0 180 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 KLHL5Q96PQ7 755 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 NAA50Q9GZZ1 169 aaKnown RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 NTN4Q9HB63 628 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 HEBP1Q9NRV9 189 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TAS2R13Q9NYV9 303 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PAIP2BQ9ULR5 123 aaKnown RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 KCTD3Q9Y597 815 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 C9JVG2 144 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TMX2-CTNND1H3BSU7 103 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 M0QZ92 97 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CCL22O00626 93 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 KATNA1O75449 491 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ECI2O75521 394 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CLPXO76031 633 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 MOCS2O96007 188 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 ALPLP05186 524 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ANXA6P08133 673 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 HAPLN1P10915 354 aaPredicted RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 TYMPP19971 482 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 MATN1P21941 496 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 ETFBP38117 255 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 SCNN1GP51170 649 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PRKG2Q13237 762 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PARP15Q460N3 678 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 FAM98BQ52LJ0 330 aaKnown RBP13.13□□□□□ -0.31
VRK3-209ENST00000594948 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 XAF1Q6GPH4 301 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 GLYATQ6IB77 296 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 GRAMD4Q6IC98 578 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 TBPL2Q6SJ96 375 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 XKR5Q6UX68 686 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CD300LGQ6UXG3 332 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 AGMOQ6ZNB7 445 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 SYVN1Q86TM6 617 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 LRRTM3Q86VH5 581 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 PGBD5Q8N414 524 aa13.13□□□□□ -0.31
VRK3-209ENST00000594948 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms