RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 C16orf46Q6P387 395 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 IYDQ6PHW0 289 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 LYSMD3Q7Z3D4 306 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 AVL9Q8NBF6 648 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 CCHCR1Q8TD31 782 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 RAPGEF5Q92565 580 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 MAML1Q92585 1016 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 FATE1Q969F0 183 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 EPB41L1Q9H4G0 881 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 CPNE7Q9UBL6 633 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 AMACRQ9UHK6 382 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 INTUQ9ULD6 942 aa14.57□□□□□ -0.08
PNKP-202ENST00000593706 TMEM184BQ9Y519 407 aaPredicted RBP14.57□□□□□ -0.08
PNKP-202ENST00000593706 ZNF487B1APH4 448 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 HLA-DQB2P05538 268 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 TCN2P20062 427 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 CASRP41180 1078 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 ARHGAP25P42331 645 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 SPINT3P49223 89 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 ZNF75DP51815 510 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 RPL26P61254 145 aaKnown RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 SRSF1Q07955 248 aaKnown RBP eCLIP14.56□□□□□ -0.08
PNKP-202ENST00000593706 FOXM1Q08050 763 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 IHHQ14623 411 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 ZNF569Q5MCW4 686 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 TIPARPQ7Z3E1 657 aaKnown RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 GAS2L3Q86XJ1 694 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 PLXDC1Q8IUK5 500 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 TRIM48Q8IWZ4 208 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 RHOT2Q8IXI1 618 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 RAVER1Q8IY67 606 aaKnown RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 APOBEC4Q8WW27 367 aaKnown RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 MRFAP1L1Q96HT8 127 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 ULBP3Q9BZM4 244 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 FAM83DQ9H4H8 585 aa14.56□□□□□ -0.08
PNKP-202ENST00000593706 RPL26L1Q9UNX3 145 aaKnown RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 MN1Q10571 1320 aaPredicted RBP14.56□□□□□ -0.08
PNKP-202ENST00000593706 A6NCN8 305 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 LILRA5A6NI73 299 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 OR5K4A6NMS3 321 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 GRID2O43424 1007 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 DLGAP3O95886 979 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 SLC4A1P02730 911 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 CCNCP24863 283 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 STAT5AP42229 794 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 HADHBP55084 474 aaKnown RBP14.55□□□□□ -0.08
PNKP-202ENST00000593706 GBE1Q04446 702 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 SLC10A2Q12908 348 aaPredicted RBP14.55□□□□□ -0.08
PNKP-202ENST00000593706 MESDQ14696 234 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 INSCQ1MX18 579 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 PLA2G4EQ3MJ16 856 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 LACTB2Q53H82 288 aaPredicted RBP14.55□□□□□ -0.08
PNKP-202ENST00000593706 LRRC38Q5VT99 294 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ALS2CLQ60I27 953 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 VSIG1Q86XK7 387 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ESX1Q8N693 406 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 KCTD6Q8NC69 237 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 CCNYQ8ND76 341 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ARRDC2Q8TBH0 407 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 LRRN4Q8WUT4 740 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 RNF31Q96EP0 1072 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 TSGA13Q96PP4 275 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 LYSMD1Q96S90 227 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
PNKP-202ENST00000593706 SPATA16Q9BXB7 569 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ADGRE3Q9BY15 652 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 SPRY4Q9C004 299 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 CARD9Q9H257 536 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ARFGAP3Q9NP61 516 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 PRDM8Q9NQV8 689 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 ANKMY1Q9P2S6 941 aa14.55□□□□□ -0.08
PNKP-202ENST00000593706 CNOT6Q9ULM6 557 aaKnown RBP14.55□□□□□ -0.08
PNKP-202ENST00000593706 NUAK1O60285 661 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 RASSF9O75901 435 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 PRLP01236 227 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 MX2P20592 715 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 KDELR1P24390 212 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 CD86P42081 329 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 GFERP55789 205 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 FOXK1P85037 733 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 UBAP2LQ14157 1087 aaKnown RBP14.54□□□□□ -0.08
PNKP-202ENST00000593706 GALNT3Q14435 633 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 IGFBP7Q16270 282 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 ZFYVE27Q5T4F4 411 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 ATP1A1-AS1Q5TC04 95 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 CRTC3Q6UUV7 619 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 MAP7D3Q8IWC1 876 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 PLD5Q8N7P1 536 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 ABHD17AQ96GS6 310 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 ZNF830Q96NB3 372 aaPredicted RBP14.54□□□□□ -0.08
PNKP-202ENST00000593706 RNF157Q96PX1 679 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 WDR24Q96S15 920 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 OR2AG1Q9H205 316 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 KLC4Q9NSK0 619 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 DTLQ9NZJ0 730 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 ATXN10Q9UBB4 475 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 KCTD3Q9Y597 815 aa14.54□□□□□ -0.08
PNKP-202ENST00000593706 PCDHB3Q9Y5E6 796 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms