RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ZNF106Q9H2Y7 1883 aaKnown RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 GLYATL1P3A0A0U1RQE8 302 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 PPM1DO15297 605 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 STX7O15400 261 aaKnown RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 METTL18O95568 372 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 LPOP22079 712 aaPredicted RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 CCKBRP32239 447 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 FASLGP48023 281 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 CLCNKAP51800 687 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 CHRNA6Q15825 494 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 BRSK1Q8TDC3 778 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 SLC37A2Q8TED4 501 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 FGF11Q92914 225 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 PRR11Q96HE9 360 aaPredicted RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 TMEM74Q96NL1 305 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 FOXP3Q9BZS1 431 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 GRPEL1Q9HAV7 217 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 ASCL3Q9NQ33 180 aa26.89■■□□□ 1.9
SMAD4-213ENST00000591914 FEZ2Q9UHY8 353 aaPredicted RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 ATXN7L1Q9ULK2 861 aaPredicted RBP26.89■■□□□ 1.9
SMAD4-213ENST00000591914 CHD6Q8TD26 2715 aa26.89■■□□□ 1.89
SMAD4-213ENST00000591914 CCDC187A0A096LP49 1063 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 C2orf81A6NN90 581 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 TMX2-CTNND1H3BSU7 103 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 LIASO43766 372 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 NRDCO43847 1150 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 CDK14O94921 469 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 INHBCP55103 352 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 OR1D5P58170 312 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 ZFP36L1Q07352 338 aaKnown RBP26.88■■□□□ 1.89
SMAD4-213ENST00000591914 BIRC2Q13490 618 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 SPARCL1Q14515 664 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 PTPRCAPQ14761 206 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 OASLQ15646 514 aaKnown RBP26.88■■□□□ 1.89
SMAD4-213ENST00000591914 KIF26BQ2KJY2 2108 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 P3H1Q32P28 736 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 LRRTM4Q86VH4 590 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF547Q8IVP9 402 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 WDR36Q8NI36 951 aaKnown RBP26.88■■□□□ 1.89
SMAD4-213ENST00000591914 LRRC45Q96CN5 670 aa26.88■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF578Q96N58 590 aaPredicted RBP26.88■■□□□ 1.89
SMAD4-213ENST00000591914 KMOO15229 486 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 GPR39O43194 453 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 ZW10O43264 779 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A9O60656 530 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A6P19224 532 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A1P22309 533 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A4P22310 534 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 ALDH4A1P30038 563 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 STIP1P31948 543 aaKnown RBP26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A3P35503 534 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A5P35504 534 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 EIF2S3P41091 472 aaKnown RBP26.87■■□□□ 1.89
SMAD4-213ENST00000591914 ERVPABLB-1P60509 514 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 TMEM115Q12893 351 aaPredicted RBP26.87■■□□□ 1.89
SMAD4-213ENST00000591914 ITGA9Q13797 1035 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 CLPPQ16740 277 aaPredicted RBP26.87■■□□□ 1.89
SMAD4-213ENST00000591914 IYDQ6PHW0 289 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 CRTC3Q6UUV7 619 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 TMPRSS9Q7Z410 1059 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 DDHD1Q8NEL9 900 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 TRIM58Q8NG06 486 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 OR4K2Q8NGD2 314 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 TIMM29Q9BSF4 260 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A7Q9HAW7 530 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A10Q9HAW8 530 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 UGT1A8Q9HAW9 530 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 EPB41L5Q9HCM4 733 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 SMOXQ9NWM0 555 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 SLC23A2Q9UGH3 650 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 PPP2R2CQ9Y2T4 447 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 ITPR1Q14643 2758 aa26.87■■□□□ 1.89
SMAD4-213ENST00000591914 PMS2P1A4D2B8 440 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 PRR19A6NJB7 356 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 CRTAMO95727 393 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 CPNE6O95741 557 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 F3P13726 295 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 CA5AP35218 305 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.86■■□□□ 1.89
SMAD4-213ENST00000591914 SLITRK4Q8IW52 837 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 GDAP1Q8TB36 358 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 SLC46A1Q96NT5 459 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 C19orf43Q9BQ61 176 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 STRADBQ9C0K7 418 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 LRRC40Q9H9A6 602 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 KLC4Q9NSK0 619 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 KCTD3Q9Y597 815 aa26.86■■□□□ 1.89
SMAD4-213ENST00000591914 TRBV23OR9-2A0A075B6M9 112 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 SLC2A4P14672 509 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 ZNF7P17097 686 aaPredicted RBP26.85■■□□□ 1.89
SMAD4-213ENST00000591914 CD1CP29017 333 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 PDE1BQ01064 536 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 EIF3IQ13347 325 aaKnown RBP26.85■■□□□ 1.89
SMAD4-213ENST00000591914 SQSTM1Q13501 440 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 INSCQ1MX18 579 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 AMZ1Q400G9 498 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 LDLRAP1Q5SW96 308 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 C11orf96Q7Z7L8 435 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 TLR10Q9BXR5 811 aa26.85■■□□□ 1.89
SMAD4-213ENST00000591914 ZCCHC2Q9C0B9 1178 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms