RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 A0A0A6YYK5 440 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ZNF891A8MT65 544 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 BTNL10A8MVZ5 291 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 B4E171 279 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 AGRPO00253 132 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.911e-8■■■□□ 17.6
BRCA1-226ENST00000591534 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 DUX1O43812 170 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CCL4P13236 92 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 SLC2A4P14672 509 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 MAP4P27816 1152 aaKnown RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CD1CP29017 333 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 MIPP30301 263 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 PCK1P35558 622 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ETV3P41162 512 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 TSPAN7P41732 249 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ACTR1BP42025 376 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 MAZP56270 477 aaKnown RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ACTR1AP61163 376 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 MC1RQ01726 317 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 SLC10A7Q0GE19 358 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 C16orf72Q14CZ0 275 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CNGA3Q16281 694 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 TMEM71Q6P5X7 295 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 RHOT2Q8IXI1 618 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 RAVER1Q8IY67 606 aaKnown RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 NRSN1Q8IZ57 195 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CACNA2D3Q8IZS8 1091 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ATPAF2Q8N5M1 289 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 ARFGAP1Q8N6T3 406 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 AVL9Q8NBF6 648 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 TRIM58Q8NG06 486 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CCL4L1Q8NHW4 92 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 CTNNBL1Q8WYA6 563 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 NKD1Q969G9 470 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 OR2M4Q96R27 311 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 SLC38A3Q99624 504 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 NUDT22Q9BRQ3 303 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 FRMD8Q9BZ67 464 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 TRIT1Q9H3H1 467 aaKnown RBP9.38□□□□□ -0.91
BRCA1-226ENST00000591534 PPP2R2CQ9Y2T4 447 aa9.38□□□□□ -0.91
BRCA1-226ENST00000591534 FTLP02792 175 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 H2AFZP0C0S5 128 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 FGF3P11487 239 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ZNF30P17039 623 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ITGB6P18564 788 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ADCY8P40145 1251 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 MAGEA1P43355 309 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 MMP13P45452 471 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 VAV2P52735 878 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 EPHB1P54762 984 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 KCNAB2Q13303 367 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 DPYSQ14117 519 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 SEPT6Q14141 434 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 CA9Q16790 459 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 KCTD16Q68DU8 428 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ALKBH5Q6P6C2 394 aaKnown RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 CEACAM20Q6UY09 585 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ADAMTSL4Q6UY14 1074 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 H2AFVQ71UI9 128 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 FAM129CQ86XR2 697 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 NRROSQ86YC3 692 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 GALNT13Q8IUC8 556 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 RCBTB1Q8NDN9 531 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 EXD1Q8NHP7 514 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 KIF18AQ8NI77 898 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 ART4Q93070 314 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 AP2M1Q96CW1 435 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 NSUN5Q96P11 429 aaKnown RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 MGME1Q9BQP7 344 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 EPB41L1Q9H4G0 881 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 C12orf49Q9H741 205 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 NOD2Q9HC29 1040 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 SPTLC3Q9NUV7 552 aa9.37□□□□□ -0.91
BRCA1-226ENST00000591534 CWC15Q9P013 229 aaKnown RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 CNOT8Q9UFF9 292 aaKnown RBP9.37□□□□□ -0.91
BRCA1-226ENST00000591534 RP1P56715 2156 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 IGHV1OR21-1A0A087WYE8 117 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 EFCAB7A8K855 629 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PYCARD-AS1I3L0S3 204 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 J3QW42 95 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 RAD1O60671 282 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 PGLSO95336 258 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 NTRK1P04629 796 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 THRAP10827 490 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 TCF4P15884 667 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 GM2AP17900 193 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 CR2P20023 1033 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 AK4P27144 223 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-226ENST00000591534 UGT1A3P35503 534 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 FASLGP48023 281 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 POLE2P56282 527 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 CYP4F2P78329 520 aa9.36□□□□□ -0.91
BRCA1-226ENST00000591534 ITKQ08881 620 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms