RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZNF711Q9Y462 761 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 MRFAP1Q9Y605 127 aa6.4□□□□□ -1.38
VPS4B-205ENST00000591383 RALGAPA1Q6GYQ0 2036 aa6.4□□□□□ -1.39
VPS4B-205ENST00000591383 DOCK9Q9BZ29 2069 aa6.4□□□□□ -1.39
VPS4B-205ENST00000591383 GON4LQ3T8J9 2241 aa6.4□□□□□ -1.39
VPS4B-205ENST00000591383 GVINP1Q7Z2Y8 2422 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 CCDC78A2IDD5 438 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 CCDC188H7C350 402 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 AREL1O15033 823 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SLC31A1O15431 190 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TTI1O43156 1089 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TSPAN6O43657 245 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 HEXIM1O94992 359 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 EPN2O95208 641 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 AP2A1O95782 977 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 AGTP01019 485 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 IGHV4-34P06331 123 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 C1SP09871 688 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 ATXN1LP0C7T5 689 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 DRD2P14416 443 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 HLA-DPA1P20036 260 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 LHCGRP22888 699 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 AKT2P31751 481 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 STIP1P31948 543 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 HNF1BP35680 557 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 MPLP40238 635 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 CCR5P51681 352 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SUOXP51687 545 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RPL26P61254 145 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RPS21P63220 83 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 NHLH1Q02575 133 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SGCGQ13326 291 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 MTM1Q13496 603 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SEMA5AQ13591 1074 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 PTK6Q13882 451 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 MAP7Q14244 749 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 IRF4Q15306 451 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SLC1A5Q15758 541 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 PARP6Q2NL67 630 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 ALS2CLQ60I27 953 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 LAIR1Q6GTX8 287 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 NAPEPLDQ6IQ20 393 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 C8orf74Q6P047 294 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 HSD11B1LQ7Z5J1 315 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TRIM69Q86WT6 500 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RAVER1Q8IY67 606 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 DNAAF3Q8N9W5 541 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 MNS1Q8NEH6 495 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SPATA4Q8NEY3 305 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 CADM4Q8NFZ8 388 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 ATL2Q8NHH9 583 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 PIH1D2Q8WWB5 315 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 FAM131CQ96AQ9 280 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TADA1Q96BN2 335 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 NUS1Q96E22 293 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RCC1LQ96I51 464 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 MCCC1Q96RQ3 725 aaPredicted RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 C1QTNF7Q9BXJ2 289 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TRIM31Q9BZY9 425 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 PCED1AQ9H1Q7 454 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SMOC1Q9H4F8 434 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RNF14Q9UBS8 474 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 CD84Q9UIB8 345 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 RPL26L1Q9UNX3 145 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
VPS4B-205ENST00000591383 EMC9Q9Y3B6 208 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 SPO11Q9Y5K1 396 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 TMEM131Q92545 1883 aa6.39□□□□□ -1.39
VPS4B-205ENST00000591383 ADAMTS9Q9P2N4 1935 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 CACNA1EQ15878 2313 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 EP300Q09472 2414 aaPredicted RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 CTAGE15A4D2H0 777 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 GOLGA8MH3BSY2 632 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 PSMD3O43242 534 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 RAD51CO43502 376 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 BUD23O43709 281 aaKnown RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 TM7SF2O76062 418 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 RECQL5O94762 991 aaPredicted RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 TMEM63AO94886 807 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 TIAF1O95411 115 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 PRLP01236 227 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 LMNAP02545 664 aaKnown RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 TUBB4AP04350 444 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 CTAGE8P0CG41 777 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 GNSP15586 552 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 ZNF30P17039 623 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 HNRNPA2B1P22626 353 aaKnown RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 CD27P26842 260 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 IGFALSP35858 605 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 ADCY8P40145 1251 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 ETV3P41162 512 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 NBL1P41271 181 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 STC1P52823 247 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 C21orf59P57076 290 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 CLDN2P57739 230 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 DHX34Q14147 1143 aaKnown RBP6.38□□□□□ -1.39
VPS4B-205ENST00000591383 FGL2Q14314 439 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 POU6F1Q14863 301 aa6.38□□□□□ -1.39
VPS4B-205ENST00000591383 SMAD1Q15797 465 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms