RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GORASP1Q9BQQ3 440 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 OSGEPL1Q9H4B0 414 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 KLC4Q9NSK0 619 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TBC1D29Q9UFV1 150 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 TMPRSS11EQ9UL52 423 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 ZNF148Q9UQR1 794 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 DNAJC16Q9Y2G8 782 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 KCTD3Q9Y597 815 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 ARL5AQ9Y689 179 aa11.94□□□□□ -0.5
TPM4-212ENST00000590180 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 D6RAR5 112 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 KMOO15229 486 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 RRP8O43159 456 aaKnown RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 PSMD3O43242 534 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 PPFIA2O75334 1257 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 CRTAMO95727 393 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 EML2O95834 649 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 ZNF7P17097 686 aaPredicted RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 TPH1P17752 444 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 STIP1P31948 543 aaKnown RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 GDF10P55107 478 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 CCZ1BP86790 482 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 CCZ1P86791 482 aaPredicted RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 TMPRSS15P98073 1019 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 SNX1Q13596 522 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 INSCQ1MX18 579 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 TBC1D25Q3MII6 688 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 MAP9Q49MG5 647 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 PHF19Q5T6S3 580 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 NKAIN2Q5VXU1 208 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 IYDQ6PHW0 289 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 FBXO39Q8N4B4 442 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 OR4K2Q8NGD2 314 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 ATG4AQ8WYN0 398 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 ZNF578Q96N58 590 aaPredicted RBP11.93□□□□□ -0.5
TPM4-212ENST00000590180 VPS35Q96QK1 796 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 GRPEL1Q9HAV7 217 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 RDH14Q9HBH5 336 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 PRDM8Q9NQV8 689 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 KCNK4Q9NYG8 393 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 SLC23A2Q9UGH3 650 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 KIF26BQ2KJY2 2108 aa11.93□□□□□ -0.5
TPM4-212ENST00000590180 GPR89AB7ZAQ6 455 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 CHUKO15111 745 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 LIASO43766 372 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 TNFSF15O95150 251 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 CPNE6O95741 557 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 IFNB1P01574 187 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 GPR89BP0CG08 455 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 SLC2A4P14672 509 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 GPR3P46089 330 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 LMAN1P49257 510 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 CCDC173Q0VFZ6 552 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 NFATC2Q13469 925 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 P3H1Q32P28 736 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 LDLRAP1Q5SW96 308 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 RAB11FIP2Q7L804 512 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 SLC9B2Q86UD5 537 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 ZNF761Q86XN6 746 aaPredicted RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 TRAPPC5Q8IUR0 188 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 SFRP1Q8N474 314 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 SLC37A2Q8TED4 501 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 AHCYL2Q96HN2 611 aaKnown RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 NAF1Q96HR8 494 aaKnown RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 SLC46A1Q96NT5 459 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 FRMD8P1Q9BZ68 369 aaPredicted RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 STN1Q9H668 368 aaKnown RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 ASB8Q9H765 288 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 THSD1Q9NS62 852 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 FEZ2Q9UHY8 353 aaPredicted RBP11.92□□□□□ -0.5
TPM4-212ENST00000590180 FKBPLQ9UIM3 349 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 PPP2R2CQ9Y2T4 447 aa11.92□□□□□ -0.5
TPM4-212ENST00000590180 A0A1W2PNU3 283 aaPredicted RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 PMS2P1A4D2B8 440 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 OR5K4A6NMS3 321 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 PDZK1P1A8MUH7 402 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 GPR39O43194 453 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 CEP104O60308 925 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 POP7O75817 140 aaKnown RBP11.91□□□□□ -0.5
TPM4-212ENST00000590180 F3P13726 295 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 VCLP18206 1134 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 MSH3P20585 1137 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 IDSP22304 550 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 ITPKBP27987 946 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 CD1CP29017 333 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 AKT1P31749 480 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 CCKBRP32239 447 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 CA5AP35218 305 aa11.91□□□□□ -0.5
TPM4-212ENST00000590180 EIF2S3P41091 472 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms