RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	LRRC40	Q9H9A6	602 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	SMOX	Q9NWM0	555 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	SMARCAL1	Q9NZC9	954 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	FKBPL	Q9UIM3	349 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	PYCARD	Q9ULZ3	195 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	ZNF148	Q9UQR1	794 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	KCNK6	Q9Y257	313 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	DRG1	Q9Y295	367 aa	Known RBP	17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	JRKL	Q9Y4A0	524 aa		17.1	■□□□□ 0.33
MBD1-221	ENST00000589867	GLYATL1P3	A0A0U1RQE8	302 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	AGAP14	A8MT82	685 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	CCL22	O00626	93 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	PPM1D	O15297	605 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	STX7	O15400	261 aa	Known RBP	17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	B4GAT1	O43505	415 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	PPFIA2	O75334	1257 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	CS	O75390	466 aa	Known RBP	17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	SUN1	O94901	812 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	IFNB1	P01574	187 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ACP5	P13686	325 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	TNNT3	P45378	269 aa	Predicted RBP	17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	CTSC	P53634	463 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	SEMA5A	Q13591	1074 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	LRP8	Q14114	963 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	NR1D2	Q14995	579 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	RTP5	Q14D33	572 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ST3GAL2	Q16842	350 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ISX	Q2M1V0	245 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	GPRC6A	Q5T6X5	926 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ZDHHC20	Q5W0Z9	365 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	CRTC3	Q6UUV7	619 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	XKR5	Q6UX68	686 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	DDHD1	Q8NEL9	900 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	COG1	Q8WTW3	980 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ZCCHC14	Q8WYQ9	949 aa	Known RBP	17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	LRIT1	Q9P2V4	623 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	DKK4	Q9UBT3	224 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	FEZ2	Q9UHY8	353 aa	Predicted RBP	17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ZMIZ1	Q9ULJ6	1067 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ZKSCAN5	Q9Y2L8	839 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	PKP3	Q9Y446	797 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	ENTPD2	Q9Y5L3	495 aa		17.09	■□□□□ 0.33
MBD1-221	ENST00000589867	CFAP47	Q6ZTR5	3102 aa		17.08	■□□□□ 0.33
MBD1-221	ENST00000589867	PMS2P1	A4D2B8	440 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	TMEM8B	A6NDV4	472 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	SGTA	O43765	313 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	NUDT21	O43809	227 aa	Known RBP	17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	VEGFD	O43915	354 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	PNLIP	P16233	465 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	CLCNKA	P51800	687 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	CYP4F3	Q08477	520 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	TMEM115	Q12893	351 aa	Predicted RBP	17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	TTC27	Q6P3X3	843 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	SPRED1	Q7Z699	444 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	B3GNT8	Q7Z7M8	397 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	SFRP1	Q8N474	314 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	RASGEF1A	Q8N9B8	481 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	OR52K1	Q8NGK4	314 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	ZNF398	Q8TD17	642 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	NAT14	Q8WUY8	206 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	DNAJC1	Q96KC8	554 aa	Known RBP	17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	C19orf43	Q9BQ61	176 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	LRRN3	Q9H3W5	708 aa		17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	SCHIP1	Q9P0W5	487 aa	Predicted RBP	17.08	■□□□□ 0.32
MBD1-221	ENST00000589867	TRBV23OR9-2	A0A075B6M9	112 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	MROH6	A6NGR9	719 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	C2orf81	A6NN90	581 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	GPR89A	B7ZAQ6	455 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	SRP72	O76094	671 aa	Known RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	CDK14	O94921	469 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	PRAMEF1	O95521	474 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	GPR89B	P0CG08	455 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	PRSS56	P0CW18	603 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	FDFT1	P37268	417 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	CDKN1C	P49918	316 aa	Predicted RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	ARSD	P51689	593 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	TMPRSS15	P98073	1019 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	POU6F1	Q14863	301 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	LONRF2	Q1L5Z9	754 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	IYD	Q6PHW0	289 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	CCNJL	Q8IV13	435 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867		Q8N9G6	341 aa	Predicted RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	OR6C4	Q8NGE1	309 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	SLC37A2	Q8TED4	501 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	PRR11	Q96HE9	360 aa	Predicted RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	DEPDC7	Q96QD5	511 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	NRSN2	Q9GZP1	204 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	ABCG4	Q9H172	646 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	RAB6B	Q9NRW1	208 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	TTC7A	Q9ULT0	858 aa	Predicted RBP	17.07	■□□□□ 0.32
MBD1-221	ENST00000589867	PIKFYVE	Q9Y2I7	2098 aa		17.07	■□□□□ 0.32
MBD1-221	ENST00000589867		H7C0S8	307 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	FANCG	O15287	622 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	PSMD3	O43242	534 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	TCEA3	O75764	348 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	CRTAM	O95727	393 aa		17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	RPLP0	P05388	317 aa	Known RBP	17.06	■□□□□ 0.32
MBD1-221	ENST00000589867	BRAF	P15056	766 aa		17.06	■□□□□ 0.32

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