RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TRIM39Q9HCM9 518 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 SMYD2Q9NRG4 433 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 GPR27Q9NS67 375 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 TMEM74BQ9NUR3 256 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 NSMCE4AQ9NXX6 385 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 RABGEF1Q9UJ41 708 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 FBXO5Q9UKT4 447 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 VPS9D1Q9Y2B5 631 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 OAS3Q9Y6K5 1087 aaKnown RBP15.03■□□□□ -0
ATG4D-211ENST00000589753 PLXNB3Q9ULL4 1909 aa15.03■□□□□ -0
ATG4D-211ENST00000589753 IGLV3-16A0A075B6K0 115 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 UQCRHLA0A096LP55 91 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 CFAP99D6REC4 459 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 TLR4O00206 839 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 VILLO15195 856 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 PIAS1O75925 651 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 C1QAP02745 245 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 UQCRHP07919 91 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 RALBP11234 206 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 HOXD12P35452 270 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 HSD17B3P37058 310 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 CSNK1EP49674 416 aaKnown RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 MPP1Q00013 466 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 TMEM115Q12893 351 aaPredicted RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 NAB1Q13506 487 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 UAP1Q16222 522 aaPredicted RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 KLHL38Q2WGJ6 581 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 KHDC1Q4VXA5 237 aaKnown RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 TPRG1LQ5T0D9 272 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 DOK6Q6PKX4 331 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 LAYNQ6UX15 382 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 KIAA0408Q6ZU52 694 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 RABEPKQ7Z6M1 372 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 ADGRG6Q86SQ4 1221 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 SLC26A11Q86WA9 606 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 CTAGE3PQ8IX95 158 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 RBFAQ8N0V3 343 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 SLC22A18ASQ8N1D0 253 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 HNRNPLLQ8WVV9 542 aaKnown RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 WDR92Q96MX6 357 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 FBXO6Q9NRD1 293 aaPredicted RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 INTS10Q9NVR2 710 aaKnown RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 ARGLU1Q9NWB6 273 aaPredicted RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 SLC17A6Q9P2U8 582 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 ATXN10Q9UBB4 475 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 SMG5Q9UPR3 1016 aaKnown RBP15.02■□□□□ -0
ATG4D-211ENST00000589753 TMEM98Q9Y2Y6 226 aa15.02■□□□□ -0
ATG4D-211ENST00000589753 SPTY2D1-AS1A0A0U1RR47 76 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 TMEM202A6NGA9 273 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 CXorf49A8MYA2 514 aaPredicted RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 VEGFDO43915 354 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 OR1I1O60431 355 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 CDK14O94921 469 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 EPN2O95208 641 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 S1PR4O95977 384 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 F7P08709 466 aaPredicted RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 ZNF7P17097 686 aaPredicted RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 NSG1P42857 185 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 LEPRP48357 1165 aaKnown RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 C21orf59P57076 290 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 B4GALNT1Q00973 533 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 GTF2H3Q13889 308 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 EFTUD2Q15029 972 aaKnown RBP eCLIP15.01□□□□□ -0.013e-7■■□□□ 12.2
ATG4D-211ENST00000589753 LAIR1Q6GTX8 287 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 ENPP7Q6UWV6 458 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 PACS1Q6VY07 963 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 MACC1Q6ZN28 852 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 MARK2Q7KZI7 788 aaKnown RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 GALNT7Q86SF2 657 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 PPM1NQ8N819 430 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 OR56A4Q8NGH8 313 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 CEP76Q8TAP6 659 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 CCDC97Q96F63 343 aaPredicted RBP15.01□□□□□ -0.01
ATG4D-211ENST00000589753 BOCQ9BWV1 1114 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 OR2AG1Q9H205 316 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 VPS18Q9P253 973 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 SLC17A4Q9Y2C5 497 aa15.01□□□□□ -0.01
ATG4D-211ENST00000589753 UBA6A0AVT1 1052 aaPredicted RBP15□□□□□ -0.01
ATG4D-211ENST00000589753 GPR89AB7ZAQ6 455 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 TNFRSF10CO14798 259 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 HAUS5O94927 633 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 AHSGP02765 367 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 CEACAM5P06731 702 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 GPR89BP0CG08 455 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 ATP1B2P14415 290 aaPredicted RBP15□□□□□ -0.01
ATG4D-211ENST00000589753 ZNF8P17098 575 aaPredicted RBP15□□□□□ -0.01
ATG4D-211ENST00000589753 POLD2P49005 469 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 NXPH1P58417 271 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 DUOXA1Q1HG43 343 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 ZNF789Q5FWF6 425 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
ATG4D-211ENST00000589753 STRA8Q7Z7C7 330 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 LRRC6Q86X45 466 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 RASGEF1AQ8N9B8 481 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 LPGAT1Q92604 370 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 CPNE1Q99829 537 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 CLPBQ9H078 707 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 TXNDC16Q9P2K2 825 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 KLQ9UEF7 1012 aa15□□□□□ -0.01
ATG4D-211ENST00000589753 MOSPD1Q9UJG1 213 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms