RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 COX14Q96I36 57 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 QKIQ96PU8 341 aaKnown RBP eCLIP11.45□□□□□ -0.58
RFX1-204ENST00000588885 NAP1L3Q99457 506 aaPredicted RBP11.45□□□□□ -0.58
RFX1-204ENST00000588885 CDH19Q9H159 772 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 OR2AG1Q9H205 316 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 RDH14Q9HBH5 336 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 FAM153AQ9UHL3 310 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 KCNK6Q9Y257 313 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 ZNF711Q9Y462 761 aa11.45□□□□□ -0.58
RFX1-204ENST00000588885 FASNP49327 2511 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 SMG1Q96Q15 3661 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 RGSL1A5PLK6 1076 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 D6RAR5 112 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 NUDT21O43809 227 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 SNX2O60749 519 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 TJP3O95049 919 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 EML2O95834 649 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 PYGLP06737 847 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 ACP5P13686 325 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 BPIP17213 487 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 RBL1P28749 1068 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 PPM1FP49593 454 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 INHBCP55103 352 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 B4GALNT1Q00973 533 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 KCTD19Q17RG1 926 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 SOWAHCQ53LP3 525 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 HENMT1Q5T8I9 393 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 BROXQ5VW32 411 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 KDELC1Q6UW63 502 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 TMPRSS9Q7Z410 1059 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 TMC3Q7Z5M5 1100 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 ZNF761Q86XN6 746 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 KLHL7Q8IXQ5 586 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 LSMEM2Q8N112 164 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 NAGSQ8N159 534 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 FBXO39Q8N4B4 442 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 IPMKQ8NFU5 416 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 WDR36Q8NI36 951 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 SNIP1Q8TAD8 396 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 MAIP1Q8WWC4 291 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 C1orf54Q8WWF1 131 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 PRR11Q96HE9 360 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 OXNAD1Q96HP4 312 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 ZNF578Q96N58 590 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 SLC46A1Q96NT5 459 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 DDX47Q9H0S4 455 aaKnown RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 ASCL3Q9NQ33 180 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.44□□□□□ -0.58
RFX1-204ENST00000588885 RSPH14Q9UHP6 348 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 APPL1Q9UKG1 709 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 EFR3BQ9Y2G0 817 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 V9GYY5 206 aaPredicted RBP11.44□□□□□ -0.58
RFX1-204ENST00000588885 IGSF10Q6WRI0 2623 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 MGAQ8IWI9 3026 aa11.44□□□□□ -0.58
RFX1-204ENST00000588885 UNC13CQ8NB66 2214 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 CCDC187A0A096LP49 1063 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 HACD1B0YJ81 288 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 APOC4-APOC2K7ER74 178 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 PPM1DO15297 605 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 DNAJC6O75061 913 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 MTX2O75431 263 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 SLC25A14O95258 325 aaPredicted RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 APOC2P02655 101 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 ZNF8P17098 575 aaPredicted RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 MPSTP25325 297 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 TNNT3P45378 269 aaPredicted RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 PCBP4P57723 403 aaKnown RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 MRPS25P82663 173 aaKnown RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 OTUD4Q01804 1114 aaKnown RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 CYP1B1Q16678 543 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 SIRPB2Q5JXA9 342 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 PHF19Q5T6S3 580 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 TTC27Q6P3X3 843 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 DARS2Q6PI48 645 aaKnown RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 CRTC3Q6UUV7 619 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 RAB11FIP2Q7L804 512 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 JAMLQ86YT9 394 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 SPACA3Q8IXA5 215 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 ACTL9Q8TC94 416 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 GRAMD1AQ96CP6 724 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 MRGPRX2Q96LB1 330 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 UBL7Q96S82 380 aaPredicted RBP11.43□□□□□ -0.58
RFX1-204ENST00000588885 KRT12Q99456 494 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 STRADBQ9C0K7 418 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 THSD1Q9NS62 852 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 ATXN10Q9UBB4 475 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 LRP4O75096 1905 aa11.43□□□□□ -0.58
RFX1-204ENST00000588885 PTPRQQ9UMZ3 2332 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 LOC285095A0A1B0GVY8 99 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 TMX2-CTNND1H3BSU7 103 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 CCDC188H7C350 402 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 PLD2O14939 933 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 KLK10O43240 276 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 MTSS1O43312 755 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 GRID2O43424 1007 aa11.42□□□□□ -0.58
RFX1-204ENST00000588885 LIASO43766 372 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms