RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ARNTLO00327 626 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 TPST1O60507 370 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 CNTN5O94779 1100 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 CPNE6O95741 557 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF12P17014 697 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 PGFP49763 221 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF140P52738 457 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-206ENST00000587730 TAF1AQ15573 450 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-206ENST00000587730 ZNF773Q6PK81 442 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 GPRIN3Q6ZVF9 776 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 LYSMD3Q7Z3D4 306 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 SFRP1Q8N474 314 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 BPIFB1Q8TDL5 484 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 FUBP1Q96AE4 644 aaKnown RBP18.43■□□□□ 0.54
DDX39A-206ENST00000587730 NSUN5Q96P11 429 aaKnown RBP18.43■□□□□ 0.54
DDX39A-206ENST00000587730 RPRD1AQ96P16 312 aaPredicted RBP18.43■□□□□ 0.54
DDX39A-206ENST00000587730 POLR1BQ9H9Y6 1135 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 MAGEE1Q9HCI5 957 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 HEBP1Q9NRV9 189 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 FAIMQ9NVQ4 179 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 SEPT3Q9UH03 358 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 PCTPQ9UKL6 214 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
DDX39A-206ENST00000587730 NLRC5Q86WI3 1866 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 C2orf81A6NN90 581 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 CCL22O00626 93 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 KATNA1O75449 491 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 BAIAP3O94812 1187 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 CTSHP09668 335 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 IMPDH2P12268 514 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TTPAP49638 278 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 DIO3P55073 304 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SPIDRQ14159 915 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 IHHQ14623 411 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 ATP6AP1LQ52LC2 224 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 FAM98BQ52LJ0 330 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 AARS2Q5JTZ9 985 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SPRYD7Q5W111 196 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 PAQR3Q6TCH7 311 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 Q6ZNX1 250 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SAPCD2Q86UD0 394 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 ZFAND4Q86XD8 727 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 RBM12BQ8IXT5 1001 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SMYD1Q8NB12 490 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 DNAJB14Q8TBM8 379 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 KCNA7Q96RP8 456 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 MGME1Q9BQP7 344 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 HGH1Q9BTY7 390 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 RPF2Q9H7B2 306 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SEMA4BQ9NPR2 832 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 ABI2Q9NYB9 513 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 EBF1Q9UH73 591 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 PCDHB5Q9Y5E4 795 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 UBA6A0AVT1 1052 aaPredicted RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 C16orf96A6NNT2 1141 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 H3BMQ9 156 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 PPP6CO00743 305 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 IGLV3-27P01718 113 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 VARSP26640 1264 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 OR1E1P30953 314 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 ALDH3A2P51648 485 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 EFEMP1Q12805 493 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 SEMA3AQ14563 771 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 RAB39AQ14964 217 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 RBM48Q5RL73 367 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 NANOGP8Q6NSW7 305 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 UGT3A1Q6NUS8 523 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 BIRC7Q96CA5 298 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 COG8Q96MW5 612 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TRIB3Q96RU7 358 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 CHID1Q9BWS9 393 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.42■□□□□ 0.549e-7■■■□□ 19
DDX39A-206ENST00000587730 MAGEH1Q9H213 219 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 NANOGQ9H9S0 305 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 ZFYVE28Q9HCC9 887 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TLR8Q9NR97 1041 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 MARCH2Q9P0N8 246 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 GMPR2Q9P2T1 348 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TRMT6Q9UJA5 497 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 NUDT5Q9UKK9 219 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TNPO3Q9Y5L0 923 aaKnown RBP18.42■□□□□ 0.54
DDX39A-206ENST00000587730 PTGDR2Q9Y5Y4 395 aa18.42■□□□□ 0.54
DDX39A-206ENST00000587730 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-206ENST00000587730 TMEM88BA6NKF7 163 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 DNAJB5O75953 348 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 PRSS23O95084 383 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 RAP2AP10114 183 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 ETFBP38117 255 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 CLCN4P51793 760 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 CBX2Q14781 532 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-206ENST00000587730 TSNQ15631 228 aaKnown RBP18.41■□□□□ 0.54
DDX39A-206ENST00000587730 RBBP7Q16576 425 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 SMU1Q2TAY7 513 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 BROXQ5VW32 411 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 RAP1GAP2Q684P5 730 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-206ENST00000587730 SYVN1Q86TM6 617 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 OR8J3Q8NGG0 315 aa18.41■□□□□ 0.54
DDX39A-206ENST00000587730 OR13C4Q8NGS5 318 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms