RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 RNF215Q9Y6U7 377 aa20.39■□□□□ 0.85
CIRBP-209ENST00000586555 NTN3O00634 580 aaPredicted RBP20.38■□□□□ 0.85
CIRBP-209ENST00000586555 LIASO43766 372 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 CDK14O94921 469 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 ZNF8P17098 575 aaPredicted RBP20.38■□□□□ 0.85
CIRBP-209ENST00000586555 TLE3Q04726 772 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 IGF2-ASQ6U949 168 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 ADGRG6Q86SQ4 1221 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 C17orf82Q86X59 251 aaPredicted RBP20.38■□□□□ 0.85
CIRBP-209ENST00000586555 ARL14Q8N4G2 192 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 Q8N9G6 341 aaPredicted RBP20.38■□□□□ 0.85
CIRBP-209ENST00000586555 APOL2Q9BQE5 337 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 STN1Q9H668 368 aaKnown RBP20.38■□□□□ 0.85
CIRBP-209ENST00000586555 ARNT2Q9HBZ2 717 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 PRKAB1Q9Y478 270 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 PLEKHM1Q9Y4G2 1056 aa20.38■□□□□ 0.85
CIRBP-209ENST00000586555 A0A1W2PNU3 283 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-209ENST00000586555 KMOO15229 486 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ACP5P13686 325 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 GABREP78334 506 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 CCL7P80098 99 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 CCDC173Q0VFZ6 552 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ATP13A5Q4VNC0 1218 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 LDLRAP1Q5SW96 308 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 LINC00523Q86TU6 105 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 LRRTM4Q86VH4 590 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 SPACA3Q8IXA5 215 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 NAGSQ8N159 534 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ATG4AQ8WYN0 398 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 RTP4Q96DX8 246 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 TMEM74Q96NL1 305 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 C19orf43Q9BQ61 176 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ARFGAP3Q9NP61 516 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ASCL3Q9NQ33 180 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 RABGEF1Q9UJ41 708 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ZKSCAN5Q9Y2L8 839 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ST14Q9Y5Y6 855 aa20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ARHGEF17Q96PE2 2063 aaPredicted RBP20.37■□□□□ 0.85
CIRBP-209ENST00000586555 ERI2A8K979 691 aaKnown RBP20.36■□□□□ 0.85
CIRBP-209ENST00000586555 CHUKO15111 745 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 ZSCAN12O43309 604 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 BUD23O43709 281 aaKnown RBP20.36■□□□□ 0.85
CIRBP-209ENST00000586555 METTL18O95568 372 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 GAS8O95995 478 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 VCLP18206 1134 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 HADHAP40939 763 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 GPR3P46089 330 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 GDF10P55107 478 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 MAZP56270 477 aaKnown RBP20.36■□□□□ 0.85
CIRBP-209ENST00000586555 ERVPABLB-1P60509 514 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 TMEM115Q12893 351 aaPredicted RBP20.36■□□□□ 0.85
CIRBP-209ENST00000586555 INSCQ1MX18 579 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 FAM151BQ6UXP7 276 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 SPRED1Q7Z699 444 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 KLHDC8BQ8IXV7 354 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 AVL9Q8NBF6 648 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 ZNF248Q8NDW4 579 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 C1orf54Q8WWF1 131 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 STRADBQ9C0K7 418 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 ENTPD2Q9Y5L3 495 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 ARL5AQ9Y689 179 aa20.36■□□□□ 0.85
CIRBP-209ENST00000586555 OR5K4A6NMS3 321 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 IFNB1P01574 187 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 ALDH4A1P30038 563 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 FDFT1P37268 417 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 LMAN1P49257 510 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 CLCNKAP51800 687 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 PCBP4P57723 403 aaKnown RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 SPARCL1Q14515 664 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 CHRNA6Q15825 494 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 CCNG2Q16589 344 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 CLPPQ16740 277 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 ZNF648Q5T619 568 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 KCTD11Q693B1 232 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 SFTPA2Q8IWL1 248 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 CCDC89Q8N998 374 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 OR4K2Q8NGD2 314 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 ZNF398Q8TD17 642 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 SH3KBP1Q96B97 665 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 PRR11Q96HE9 360 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 FCRL3Q96P31 734 aaPredicted RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 HOMER3Q9NSC5 361 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 KLC4Q9NSK0 619 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 KCNK6Q9Y257 313 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 AHCTF1Q8WYP5 2266 aa20.35■□□□□ 0.85
CIRBP-209ENST00000586555 HELZ2Q9BYK8 2649 aaKnown RBP20.35■□□□□ 0.85
CIRBP-209ENST00000586555 A0A1W2PQM1 296 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 D6RAR5 112 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 E7EVH7 732 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 TK2O00142 265 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 ATXN7O15265 892 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-209ENST00000586555 SNX2O60749 519 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 KCNJ13O60928 360 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 AP2A1O95782 977 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 ZNF7P17097 686 aaPredicted RBP20.34■□□□□ 0.85
CIRBP-209ENST00000586555 MSNP26038 577 aaKnown RBP20.34■□□□□ 0.85
CIRBP-209ENST00000586555 INHBCP55103 352 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 OLIG2Q13516 323 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 SNX1Q13596 522 aa20.34■□□□□ 0.85
CIRBP-209ENST00000586555 NR1D2Q14995 579 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms